New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3511889 = | 52 (0.940) | 3 (0.060) | 3/250 | NT | 5.6% | coding (557/4158 nt) | PP_3108 | rhs family protein |
? | NC_002947 | 3511940 = | 50 (0.920) | coding (608/4158 nt) | PP_3108 | rhs family protein |
GTGAACTTCAGGGCGCAAGGCATGACGGCTTTCATGCCGGCCTGGGTACCCGCCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3511946‑3511889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGAAATCGACTTCAGC > NC_002947/3511940‑3512085 GTGAACTTCAGGGCGCAAGGCATGACGGCTTTCATGCCGGCCTGGGTACCCGCCTTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAA > 6:282465/1‑149 TGAACTTCAGGGCGCAAGGCATGACGGCTTTCATGCCGGCCTGGGTACCCGCCTTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAAC > 4:54572/1‑149 ACTTCAGGGCGCAAGGCATGACGGCTTTCATGCCGGCCTGGGTACCCGCCTTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCC < 3:54572/149‑1 TGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGAAATCGACTTCAGC > 4:283161/1‑149 TGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGAAATCGACTTCAGC > 7:195903/1‑149 TGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTCGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGTCGGGCCGCAAGCTGATGCCCGATAAAATCGACTTCAGC > 7:74804/1‑149 GTGAACTTCAGGGCGCAAGGCATGACGGCTTTCATGCCGGCCTGGGTACCCGCCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3511946‑3511889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGAAATCGACTTCAGC > NC_002947/3511940‑3512085 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |