New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3511889 =52 (0.940)3 (0.060) 3/250 NT 5.6% coding (557/4158 nt) PP_3108 rhs family protein
?NC_002947 3511940 = 50 (0.920)coding (608/4158 nt) PP_3108 rhs family protein

CCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCG  >  NC_002947/3511742‑3512035
                                                                                                                                                   |                                                                                                                                                  
ccaTTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGAt                                                                                                                                                    >  6:293957/1‑148 (MQ=255)
 gctgaagtcgattttatcgggcatcagcttgcggcccgacgtgaggtcgacggggttgccgaccaggccgccgatagccttgcgggcgacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaactTCa                                                                                                                                                  >  7:74804‑M1/147‑149 (MQ=255)
 gctgaagtcgatttcatcggggatcagcttgcggcccgtcgtgaggtcgacggggttgccgaccaggccgccgatagccttgcgggccacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaactTCa                                                                                                                                                  >  7:195903‑M1/147‑149 (MQ=255)
 gctgaagtcgatttcatcggggatcagcttgcggcccgtcgtgaggtcgacggggttgccgaccaggccgccgatagccttgcgggccacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaactTCa                                                                                                                                                  >  4:283161‑M1/147‑149 (MQ=255)
      ccGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCg                                                                                                                                             >  1:200934/1‑149 (MQ=255)
       cGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCgg                                                                                                                                            <  1:340482/149‑1 (MQ=255)
              tCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTAcc                                                                                                                                       >  3:178436/1‑147 (MQ=255)
                 gACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGc                                                                                                                                  <  3:79843/149‑1 (MQ=255)
                 gACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGc                                                                                                                                  >  2:134129/1‑149 (MQ=255)
                  aCAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTTTCGCCCAGCTGATCAAGGCGGGTACCCAGGcc                                                                                                                                 >  6:20472/1‑149 (MQ=255)
                     aCGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGAGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGc                                                                                                                              <  8:265514/149‑1 (MQ=255)
                       gTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCAt                                                                                                                            <  5:293957/149‑1 (MQ=255)
                                   ggcggcACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCAt                                                                                                                <  1:53493/149‑1 (MQ=255)
                                           cTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTgcg                                                                                                        <  5:249065/149‑1 (MQ=255)
                                             aCCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCAATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTAACCAGGCCGGCATGAAAGCCGTCATGCCTTGCGcc                                                                                                      >  5:188213/1‑149 (MQ=255)
                                                   atcTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGGGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGGCATGCCTTGCGCCCTGaa                                                                                                 <  8:313159/146‑1 (MQ=255)
                                                    ggggttgccgaccaggccgccgatagccttgcgggccacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaactTCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGt                                                                                               <  3:54572‑M1/54‑1 (MQ=255)
                                                    ccTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGt                                                                                               >  4:188037/1‑149 (MQ=255)
                                                       gttgccgaccaggccgccgatagccttgcgggccacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaactTCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCa                                                                                            >  4:54572‑M1/93‑149 (MQ=255)
                                                        ttgccgaccaggccgccgatagccttgcgggccacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaactTCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAc                                                                                           >  6:282465‑M1/92‑149 (MQ=255)
                                                         ccGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcg                                                                                          >  5:343857/1‑149 (MQ=255)
                                                          cGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcgg                                                                                         >  6:57086/1‑149 (MQ=255)
                                                               aCGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcggccggc                                                                                    <  6:343857/149‑1 (MQ=255)
                                                                  aTGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTtc                                                                                 <  1:134129/149‑1 (MQ=255)
                                                                        tCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATc                                                                                                                                                   <  2:27715/77‑1 (MQ=255)
                                                                        tCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATc                                                                                                                                                   >  1:27715/1‑77 (MQ=255)
                                                                        tCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGcc                                                                           >  3:76607/1‑149 (MQ=255)
                                                                        tCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGcc                                                                           >  1:155712/1‑149 (MQ=255)
                                                                          ccGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGAt                                                                                                                                                    <  5:367159/74‑1 (MQ=255)
                                                                          ccGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGAt                                                                                                                                                    >  6:367159/1‑74 (MQ=255)
                                                                          ccGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCgg                                                                         >  7:78654/1‑149 (MQ=255)
                                                                                tGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAgg                                                                    <  4:178436/148‑1 (MQ=255)
                                                                                tGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGt                                                                   <  4:15502/149‑1 (MQ=255)
                                                                                  gCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTgg                                                                 >  8:56471/1‑149 (MQ=255)
                                                                                    tGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCgg                                                                                                                               >  3:228529/1‑85 (MQ=255)
                                                                                    tGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCgg                                                                                                                               <  4:228529/85‑1 (MQ=255)
                                                                                      cgcACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcggccgg                                                                                     <  2:216918/125‑1 (MQ=255)
                                                                                      cgcACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcggccgg                                                                                     >  1:216918/1‑125 (MQ=255)
                                                                                      cgcACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGcc                                                               <  2:200934/147‑1 (MQ=255)
                                                                                       gcACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCACGGCGGGTACCCAGGCCGGCa                                                                                                                             <  1:34759/84‑1 (MQ=255)
                                                                                       gcACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCa                                                                                                                             >  2:34759/1‑84 (MQ=255)
                                                                                        caccacCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGcc                                                           <  5:57086/149‑1 (MQ=255)
                                                                                        caccacCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGcc                                                           <  3:188037/149‑1 (MQ=255)
                                                                                              cGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTAtg                                                     >  7:98576/1‑149 (MQ=255)
                                                                                                  gATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGt                                                 <  2:155712/149‑1 (MQ=255)
                                                                                                        cTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAAcc                                           >  2:247800/1‑149 (MQ=255)
                                                                                                         tGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAAccc                                          >  7:5391/1‑149 (MQ=255)
                                                                                                         tGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAAccc                                          >  5:68574/1‑149 (MQ=255)
                                                                                                           aTGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGt                                        <  1:247800/149‑1 (MQ=255)
                                                                                                             ggCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAc                                                                                           <  4:14056/96‑1 (MQ=255)
                                                                                                             ggCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAc                                                                                           >  3:14056/1‑96 (MQ=255)
                                                                                                                cATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGccc                                   <  8:78654/149‑1 (MQ=255)
                                                                                                                     ccGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAg                              <  5:46930/149‑1 (MQ=255)
                                                                                                                      cGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAgg                             >  3:287951/1‑149 (MQ=255)
                                                                                                                                 gCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCggcggc                  <  6:188213/149‑1 (MQ=255)
                                                                                                                                 gCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCggcggc                  <  4:76607/149‑1 (MQ=255)
                                                                                                                                 gCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCggcggc                  <  8:5391/149‑1 (MQ=255)
                                                                                                                                      aTCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTAtgtg                                                   <  1:50836/111‑1 (MQ=255)
                                                                                                                                      aTCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCATTAAGTTCACGGCCGGATTCGTCGCCGGTGAGGTGGCCAGCCGTTAtttg                                                   >  2:50836/1‑111 (MQ=255)
                                                                                                                                            cAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCaa       >  1:283052/1‑149 (MQ=255)
                                                                                                                                             aGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCaa                               >  4:211628/1‑124 (MQ=255)
                                                                                                                                             aGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCaa                               <  3:211628/124‑1 (MQ=255)
                                                                                                                                             aGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAAc      >  5:242945/1‑149 (MQ=255)
                                                                                                                                              gCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAAcc     <  6:242945/149‑1 (MQ=255)
                                                                                                                                                tGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCCGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAAcccc   >  1:112535/1‑149 (MQ=255)
                                                                                                                                                 gATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCg  >  5:32793/1‑149 (MQ=255)
                                                                                                                                                 gATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCg  >  5:27564/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCG  >  NC_002947/3511742‑3512035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.