New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3511889 =	52 (0.940)	3 (0.060)	3/250	NT	5.6%	coding (557/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	3511940 =	50 (0.920)					coding (608/4158 nt)	PP_3108	rhs family protein

ACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGAAATCGACTTCAGC  >  NC_002947/3511793‑3512085                                                                                                                                                    |                                                                                                                                                  atcTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGGGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGGCATGCCTTGCGCCCTGaa                                                                                                                                                   <  8:313159/146‑1 (MQ=255)  ggggttgccgaccaggccgccgatagccttgcgggccacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaactTCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGt                                                                                                                                                 <  3:54572‑M1/54‑1 (MQ=255)  ccTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGt                                                                                                                                                 >  4:188037/1‑149 (MQ=255)     gttgccgaccaggccgccgatagccttgcgggccacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaactTCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCa                                                                                                                                              >  4:54572‑M1/93‑149 (MQ=255)      ttgccgaccaggccgccgatagccttgcgggccacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaactTCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAc                                                                                                                                             >  6:282465‑M1/92‑149 (MQ=255)       ccGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcg                                                                                                                                            >  5:343857/1‑149 (MQ=255)        cGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcgg                                                                                                                                           >  6:57086/1‑149 (MQ=255)             aCGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcggccggc                                                                                                                                      <  6:343857/149‑1 (MQ=255)                aTGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTtc                                                                                                                                   <  1:134129/149‑1 (MQ=255)                      tCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGcc                                                                                                                             >  1:155712/1‑149 (MQ=255)                      tCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGcc                                                                                                                             >  3:76607/1‑149 (MQ=255)                        ccGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCgg                                                                                                                           >  7:78654/1‑149 (MQ=255)                              tGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAgg                                                                                                                      <  4:178436/148‑1 (MQ=255)                              tGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGt                                                                                                                     <  4:15502/149‑1 (MQ=255)                                gCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTgg                                                                                                                   >  8:56471/1‑149 (MQ=255)                                    cgcACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcggccgg                                                                                                                                       >  1:216918/1‑125 (MQ=255)                                    cgcACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAcggccgg                                                                                                                                       <  2:216918/125‑1 (MQ=255)                                    cgcACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGcc                                                                                                                 <  2:200934/147‑1 (MQ=255)                                      caccacCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGcc                                                                                                             <  3:188037/149‑1 (MQ=255)                                      caccacCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGcc                                                                                                             <  5:57086/149‑1 (MQ=255)                                            cGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTAtg                                                                                                       >  7:98576/1‑149 (MQ=255)                                                gATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGt                                                                                                   <  2:155712/149‑1 (MQ=255)                                                      cTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAAcc                                                                                             >  2:247800/1‑149 (MQ=255)                                                       tGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAAccc                                                                                            >  5:68574/1‑149 (MQ=255)                                                       tGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAAccc                                                                                            >  7:5391/1‑149 (MQ=255)                                                         aTGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGt                                                                                          <  1:247800/149‑1 (MQ=255)                                                           ggCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAc                                                                                                                                             >  3:14056/1‑96 (MQ=255)                                                           ggCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCAc                                                                                                                                             <  4:14056/96‑1 (MQ=255)                                                              cATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGccc                                                                                     <  8:78654/149‑1 (MQ=255)                                                                   ccGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAg                                                                                <  5:46930/149‑1 (MQ=255)                                                                    cGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAgg                                                                               >  3:287951/1‑149 (MQ=255)                                                                               gCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCggcggc                                                                    <  4:76607/149‑1 (MQ=255)                                                                               gCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCggcggc                                                                    <  8:5391/149‑1 (MQ=255)                                                                               gCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCggcggc                                                                    <  6:188213/149‑1 (MQ=255)                                                                                    aTCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTAtgtg                                                                                                     <  1:50836/111‑1 (MQ=255)                                                                                    aTCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCATTAAGTTCACGGCCGGATTCGTCGCCGGTGAGGTGGCCAGCCGTTAtttg                                                                                                     >  2:50836/1‑111 (MQ=255)                                                                                          gtgaacttcagggcgcaaggcatgacggctttcatgccggcctgggtacccgccttgaAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCaa                                                         >  6:282465‑M2/59‑149 (MQ=255)                                                                                          cAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCaa                                                         >  1:283052/1‑149 (MQ=255)                                                                                           tgaacttcagggcgcaaggcatgacggctttcatgccggcctgggtacccgccttgaAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAAc                                                        >  4:54572‑M2/58‑149 (MQ=255)                                                                                           aGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCaa                                                                                 >  4:211628/1‑124 (MQ=255)                                                                                           aGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCaa                                                                                 <  3:211628/124‑1 (MQ=255)                                                                                           aGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAAc                                                        >  5:242945/1‑149 (MQ=255)                                                                                            gCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAAcc                                                       <  6:242945/149‑1 (MQ=255)                                                                                              tGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCCGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAAcccc                                                     >  1:112535/1‑149 (MQ=255)                                                                                              acttcagggcgcaaggcatgacggctttcatgccggcctgggtacccgccttgaAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAAcccc                                                     <  3:54572‑M2/95‑1 (MQ=255)                                                                                               gATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCg                                                    >  5:32793/1‑149 (MQ=255)                                                                                               gATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCg                                                    >  5:27564/1‑149 (MQ=255)                                                                                                    aGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTc                                                  >  8:26227/1‑146 (MQ=255)                                                                                                    aGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTc                                                  <  7:26227/146‑1 (MQ=255)                                                                                                         ggTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCac                                          >  5:304898/1‑149 (MQ=255)                                                                                                                 ggCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGcc                                  <  6:304898/149‑1 (MQ=255)                                                                                                                   ccGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCg                                 >  4:350566/1‑148 (MQ=255)                                                                                                                   aaggCATGACGGCTTTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAg                                                                                <  5:145554/99‑1 (MQ=255)                                                                                                                   aaggCATGACGGCTTTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAg                                                                                >  6:145554/3‑101 (MQ=255)                                                                                                                       cATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGc                            <  8:98576/149‑1 (MQ=255)                                                                                                                           aaaGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGa                         <  6:68574/148‑1 (MQ=255)                                                                                                                                      gCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGaaa             >  2:263585/1‑149 (MQ=255)                                                                                                                                       ccTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGAAAt            >  5:176599/1‑149 (MQ=255)                                                                                                                                                 tgaAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGAAATCGACTTCAGc  >  7:195903‑M2/4‑149 (MQ=255)                                                                                                                                                 tgaAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGAAATCGACTTCAGc  >  4:283161‑M2/4‑149 (MQ=255)                                                                                                                                                 tgaAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTCGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGTCGGGCCGCAAGCTGATGCCCGATAAAATCGACTTCAGc  >  7:74804‑M2/4‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                  ACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTGGCCCGCAAGGCTATCGGCGGCCTGGTCGGCAACCCCGTCGACCTCACGACGGGCCGCAAGCTGATCCCCGATGAAATCGACTTCAGC  >  NC_002947/3511793‑3512085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.