| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3664357 = | 42 (0.760) | 3 (0.060) | 3/242 | NT | 6.8% | coding (247/966 nt) | PP_3228 | aliphatic sulfonate‑binding protein |
| ? | NC_002947 | 3664409 = | 42 (0.800) | coding (299/966 nt) | PP_3228 | aliphatic sulfonate‑binding protein | |||||
CCCTCGCCCGGTCGCGATGCGCTTGCCCTTGAGTTCGGCCGCACTGCGCAGCGGCGCCTCCGGCCGCACCAGCAACGCCGTGCCATAAGGGTCGGACTTGTCCACTGCGATGGCCTTGACCGGTGCTCCGGAGGCCAGCACGAACAGCAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3664509‑3664357‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagtggACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAGCGCATCGCGACCGGGCGAGGGTCGATCGGGCACCACCTGGCGCTCAAGGCGCTGGCCCAGGCAG > NC_002947/3664409‑3664552 CCCTCGCCCGGTCGCGATGCGCTTGCCCTTGAGTTCGGCCGCACTGCGCAGCGGCGCCTCCGGCCGCACCAGCAACGCCGTGCCATAAGGGTCGGACTTGTCCACTGCGATGGCCTTGACCGGTGCTCCGGAGGCCAGCACGAACAGCA < 3:200935/149‑1 ACTTGTCCACTGCGATGGCCTTGACCGGTGCTCCGGAGGCCAGCACGAACAGCAGTGGACAAGTCAGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAGCGCATCGCGAC > 8:333080/1‑149 TTGTCCACTGCGATGGCCTTGACCGGTGCTCCGGAGGCCAGCACGAACAGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAGCGCATCGCGACCG > 8:232635/1‑149 TCCACTGCGATGGCCTTGACCGGTGCTCCGGAGGCCAGCACGAACAGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAGCGCATCGCGACCGGG < 7:333080/148‑1 AGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAGCGCATCGCGACCGGGCGAGGGTCGATCGGGCACCACCTGGCGCTCAAGGCGCTGGCCCAGGCAG > 3:189266/1‑149 CCCTCGCCCGGTCGCGATGCGCTTGCCCTTGAGTTCGGCCGCACTGCGCAGCGGCGCCTCCGGCCGCACCAGCAACGCCGTGCCATAAGGGTCGGACTTGTCCACTGCGATGGCCTTGACCGGTGCTCCGGAGGCCAGCACGAACAGCAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3664509‑3664357‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagtggACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAGCGCATCGCGACCGGGCGAGGGTCGATCGGGCACCACCTGGCGCTCAAGGCGCTGGCCCAGGCAG > NC_002947/3664409‑3664552 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |