New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3664357 =	42 (0.760)	3 (0.060)	3/242	NT	6.8%	coding (247/966 nt)	PP_3228	aliphatic sulfonate‑binding protein
	?	NC_002947	3664409 =	42 (0.800)					coding (299/966 nt)	PP_3228	aliphatic sulfonate‑binding protein

GAAGGGTAACATGCGCGCCCAGCTGGAGGCCGCCGACGCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAGCGCATCGCGACCGGGCG  >  NC_002947/3664209‑3664505                                                                                                                                                     |                                                                                                                                                     gAAGGGTAACATGCGCGCCCAGCTGGAGGCCGCCGACGCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGTGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATgcgc                                                                                                                                                      <  1:259989/149‑1 (MQ=255)     ggTAACATGCGCGCCCAGCTGGAGGCCGCCGACGCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCAct                                                                                                                                                  <  8:329589/149‑1 (MQ=255)     ctgcctgggccagcgccttgagcgccaggtggtgcccgatcgaccctcgcccggtcgcgatgcgcttgcccttgagttcggccgcactgcgcagcggcgcctccggccgcaccagcaacgccgtgccataagggtcggacttgtCCAct                                                                                                                                                  >  3:189266‑M1/145‑149 (MQ=255)                   ccAGCTGGAGGCCGCCGACGCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCActg                                                                                                                                                 >  1:358552/1‑136 (MQ=255)                   ccAGCTGGAGGCCGCCGACGCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCActg                                                                                                                                                 <  2:358552/136‑1 (MQ=255)                    cAGCTGGAGGCCGCCGACGCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTgac                                                                                                                                   >  2:317601/1‑147 (MQ=255)                             gccgccGACGCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAg                                                                                                                           <  6:53772/148‑1 (MQ=255)                              ccgccgACGCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCa                                                                                                                         >  7:46451/1‑149 (MQ=255)                                      gCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTc                                                                                                                   >  1:83946/1‑147 (MQ=255)                                        ccTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAgg                                                                                                               >  7:63332/1‑149 (MQ=255)                                           gcgcGACCCGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCa                                                                                                            >  4:149838/1‑149 (MQ=255)                                                  cTGCCCTACGTCATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCTTCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCGGGAGCACCGGTCAAGGCCATCGCAGt                                                                                                     <  6:294938/149‑1 (MQ=255)                                                     cccTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTg                                                                                                    <  2:83946/147‑1 (MQ=255)                                                      cccggtcgcgatgcgcttgcccttgagttcggccgcactgcgcagcggcgcctccggccgcaccagcaacgccgtgccataagggtcggacttgtCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGa                                                                                                  <  7:333080‑M1/53‑1 (MQ=255)                                                       cTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAg                                                                                                                >  3:233841/1‑133 (MQ=255)                                                       cTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAg                                                                                                                <  4:233841/133‑1 (MQ=255)                                                        cggtcgcgatgcgcttgcccttgagttcggccgcactgcgcagcggcgcctccggccgcaccagcaacgccgtgccataagggtcggacttgtCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACaa                                                                                               >  8:232635‑M1/94‑149 (MQ=255)                                                          gtcgcgatgcgcttgcccttgagttcggccgcactgcgcagcggcgcctccggccgcaccagcaacgccgtgccataagggtctgacttgtCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGt                                                                                             >  8:333080‑M1/92‑149 (MQ=255)                                                           gACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCTCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTc                                                                                            <  3:334775/149‑1 (MQ=255)                                                                 cGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGTATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGc                                                                                                                                   <  8:272697/104‑1 (MQ=255)                                                                 cGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGTATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGc                                                                                                                                   >  7:272697/1‑104 (MQ=255)                                                                  gCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGc                                                                                                                                       >  4:108224/1‑99 (MQ=255)                                                                  gCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGc                                                                                                                                       <  3:108224/99‑1 (MQ=255)                                                                     gggCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTAt                                                                                  <  8:46451/149‑1 (MQ=255)                                                                                ccTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGAc                                                                                        <  8:166197/132‑1 (MQ=255)                                                                                ccTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGAc                                                                                        >  7:166197/1‑132 (MQ=255)                                                                                    ccgccgCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTg                                                                   >  2:198432/1‑149 (MQ=255)                                                                                    ccgccgCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGACCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGc                                                                     <  1:317601/147‑1 (MQ=255)                                                                                      gccgcgccgcTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGCCCCTTATGGCACGGCGTTGCTGGt                                                                 >  6:44992/1‑149 (MQ=255)                                                                                              gcTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCgg                                                         <  3:149838/149‑1 (MQ=255)                                                                                                tGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTg                                                                   >  6:70983/1‑137 (MQ=255)                                                                                                tGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTg                                                                   <  5:70983/137‑1 (MQ=255)                                                                                                  gCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGgc                                                     >  7:78664/1‑149 (MQ=255)                                                                                                  gCCGAGGCGCTCAACGCTGGGGCGATCGATCCCGGCATCATCGGCGATGCGCCACTGCTGTGCGTGCGGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAg                                                       <  4:173437/147‑1 (MQ=255)                                                                                                    cGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGgcgc                                                   >  8:320439/1‑149 (MQ=255)                                                                                                                cGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTg                                       <  8:78664/149‑1 (MQ=255)                                                                                                                     gggCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGcc                                  <  8:63332/149‑1 (MQ=255)                                                                                                                      ggCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGcc                                  >  2:191928/1‑148 (MQ=255)                                                                                                                        cgatcgatGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGaa                               <  7:320439/149‑1 (MQ=255)                                                                                                                          atcgatGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACt                             >  6:89507/1‑149 (MQ=255)                                                                                                                              atGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAg                         >  1:205042/1‑149 (MQ=255)                                                                                                                                gCCGGCATCAACGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAggg                       >  6:193098/1‑149 (MQ=255)                                                                                                                                   ggCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGc                                   >  8:221255/1‑134 (MQ=255)                                                                                                                                   ggCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGc                                   <  7:221255/134‑1 (MQ=255)                                                                                                                                     cataatCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAgc                  >  6:69716/1‑149 (MQ=255)                                                                                                                                          tcGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGAACCGGTCAAGGCCATCGCAGTGGACAAGTAAGACCCTTATGGCAAGGCGTTGCTGGTGCGGCAGGAGGCGCCGCTGCGCAGTGCGGCCGAACTAAAGGGCAAGCGCATc             >  3:206651/1‑149 (MQ=255)                                                                                                                                             gCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAgcg                 >  2:355770/1‑142 (MQ=255)                                                                                                                                             gCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAgcg                 <  1:355770/142‑1 (MQ=255)                                                                                                                                                    gcCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGt                                                                 >  8:164554/1‑87 (MQ=255)                                                                                                                                                    gcCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGt                                                                 <  7:164554/87‑1 (MQ=255)                                                                                                                                                    gcCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAGCGCATCGCGACCGGGc   >  6:347606/1‑149 (MQ=255)                                                                                                                                                     ccAGTGCGGTTCGTGCTGGCCTCCGGAGCGCCGGTCAAGGCCATGGCAGTGGAGAAGTCCGACGCGTATGGCGCGGCGGTGGTGGTGCGGCCGGAGGCGCCGCTGCGCAGGGCGGCGGTGCTCAGGGGCATGCGCATCGCGGCCGGGCg  >  8:313139/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GAAGGGTAACATGCGCGCCCAGCTGGAGGCCGCCGACGCCCTGCGCGACCTGCCCTACGACATCCGCTGGGCCGAGTTCCCTGCCGCCGCGCCGCTGGCCGAGGCGCTCAACGCTGGGGCGATCGATGCCGGCATCATCGGCGATGCGCCACTGCTGTTCGTGCTGGCCTCCGGAGCACCGGTCAAGGCCATCGCAGTGGACAAGTCCGACCCTTATGGCACGGCGTTGCTGGTGCGGCCGGAGGCGCCGCTGCGCAGTGCGGCCGAACTCAAGGGCAAGCGCATCGCGACCGGGCG  >  NC_002947/3664209‑3664505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.