New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3767345	38 (0.690)	3 (0.060)	3/244	NT	7.4%	coding (778/1290 nt)	PP_3329	membrane protein
	?	NC_002947	= 3767379	39 (0.740)					coding (812/1290 nt)	PP_3329	membrane protein

AGACCGGCTATGTACAGCACATCGATGTCCTCACGCTGAGCAAGATTGCAACGCGCACCGAGATTCGAATTTTCCTCGAAGTTCTGCCTGGCACCTTTGTACATGAGGGTATGGTGGTGGCACGGGCCTTGGCCGTGAATGGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3767199‑3767345 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagcATCTCGATGTCCAGCGCGCCAGTGTCATCGAGCGGCTCGCCA  <  NC_002947/3767379‑3767338                                                                                                                                                                                               AGACCGGCTATGTACAGCACATCGATGTCCTCACGCTGAGCAAGATTGCAACGCGCACCGAGATTCGAATTTTCCTCGAAGTTCTGCCTGGCACCTTTGTACATGAGGGTATGGTGGTGGCACGGGCCTTGGCCGTGAATGGCGAGCAT                                          <  6:220055/149‑1                                       AGCAAGATTGCAACGCGCACCGAGATTCGAATTTTCCTCGAAGTTCTGCCTGGCACCTTTGTACATGAGGGTATGGTGGTGGCACGGGCCTTGGCCGTGAATGGCGAGCATCTCGATGTCCAGCGCGCCAGTGTCATCGAGCGGCTCGC    <  6:296609/149‑1                                          AAGATTGCAACGCGCACCGAGATTCGAATTTTCCTCGAAGTTCTGCCTGGCACCTTTGTACATGAGGGTATGGTGGTGGCACGGGCCTTGGCCGTGAATGGCGAGCATCTCGATGTCCAGCGCGCCAGTGTCATCGAGCGGCTCGCCA  >  7:155673/1‑148                                          AAGATTGCAACGCGCACCGAGATTCGAATTTTCCTCGAAGTTCTGCCTGGCACCTTTGTACATGAGGGTATGGTGGTGGCACGGGCCTTGGCCGTGAATGGCGAGCATCTCGATGTCCAGCGCGCCAGTGTCATCGAGCGGCTCGCCA  <  8:155673/148‑1                                                                                                                                                                                               AGACCGGCTATGTACAGCACATCGATGTCCTCACGCTGAGCAAGATTGCAACGCGCACCGAGATTCGAATTTTCCTCGAAGTTCTGCCTGGCACCTTTGTACATGAGGGTATGGTGGTGGCACGGGCCTTGGCCGTGAATGGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3767199‑3767345 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagcATCTCGATGTCCAGCGCGCCAGTGTCATCGAGCGGCTCGCCA  <  NC_002947/3767379‑3767338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.