New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3841612 | 47 (0.850) | 3 (0.060) | 3/242 | NT | 6.6% | coding (1273/1317 nt) | PP_3391 | tartrate MFS transporter |
? | NC_002947 | = 3841638 | 41 (0.780) | coding (1247/1317 nt) | PP_3391 | tartrate MFS transporter |
ACAGGCGCAGTAAAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3841462‑3841612 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgcTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGGTGGTGATGCGTTACGTGCGCAACCCCAAAAGCTGATTGGCGCTGAGTCTTCGAACAACAACAAGAATAAGCACAAGGCATACCAATGATCGTGATCTTTCGGCGAGCATCGC < NC_002947/3841638‑3841491 ACAGGCGCAGTAAAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCAT > 2:352245/1‑149 GCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTG < 1:352245/148‑1 CGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGG < 1:10638/147‑1 CGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGG > 2:10638/1‑147 GCATGCTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGGTGGTGATGCGTTACGTGCGCAACCCCAAAAGCTGATTGGCGCTGAGTCTTCGAACAACAACAAGAATAAGCACAAGGCATACCAATGATCGTGATCTTTCGGCGAG > 2:226429/1‑148 CTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGGTGGTGATGCGTTACGTGCGCAACCCCAAAAGCTGATTGGCGCTGAGTCTTCGAACAACAACAAGAATAAGCACAAGGCATACCAATGATCGTGATCTTTCGGCGAGCATCGC > 6:244692/1‑149 ACAGGCGCAGTAAAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3841462‑3841612 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgcTGTCAATCGCGCCGCTGATCCTGGTCGCATGCCTGGTGGTGATGCGTTACGTGCGCAACCCCAAAAGCTGATTGGCGCTGAGTCTTCGAACAACAACAAGAATAAGCACAAGGCATACCAATGATCGTGATCTTTCGGCGAGCATCGC < NC_002947/3841638‑3841491 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |