New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3841612	47 (0.850)	3 (0.060)	3/242	NT	6.6%	coding (1273/1317 nt)	PP_3391	tartrate MFS transporter
	?	NC_002947	= 3841638	41 (0.780)					coding (1247/1317 nt)	PP_3391	tartrate MFS transporter

GCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGCCAGCCCCGAGAACGTCGACTGTGGAATGGTC  >  NC_002947/3841491‑3841784                                                                                                                                                    |                                                                                                                                                   gCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAg                                                                                                                                                   >  6:244692‑M2/1‑148 (MQ=255)       cTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAgcatgc                                                                                                                                              >  2:226429‑M2/1‑142 (MQ=255)              aaaGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACa                                                                                                                                                    <  8:256785/135‑1 (MQ=255)              aaaGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAg                                                                                                                                      <  6:25671/149‑1 (MQ=255)              aaaGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGAGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACa                                                                                                                                                    >  7:256785/1‑135 (MQ=255)                              ggTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGt                                                                                                                      >  4:316609/1‑149 (MQ=255)                                    ccTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTg                                                                                                                 <  1:356718/148‑1 (MQ=255)                                            ttATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCAATGTAGGTACTGTCGGTAAGGTCATTGATCTTGcc                                                                                                         >  5:36566/1‑148 (MQ=255)                                             tATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCcca                                                                                                       >  7:124306/1‑149 (MQ=255)                                                 cTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCccacca                                                                                                    <  8:277540/148‑1 (MQ=255)                                                 cTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCAt                                                                                                   >  6:227327/1‑149 (MQ=255)                                                     ttgttgttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCAc                                                                                                <  6:36566/148‑1 (MQ=255)                                                        ttgttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGt                                                                                            >  5:235940/1‑149 (MQ=255)                                                        ttgttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGt                                                                                            >  7:35237/1‑149 (MQ=255)                                                           ttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTgg                                                                                             >  4:311548/1‑145 (MQ=255)                                                           ttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTgg                                                                                             <  3:311548/145‑1 (MQ=255)                                                           ttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGc                                                                                          >  2:312580/1‑148 (MQ=255)                                                             cGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCaa                                                                                        <  5:227327/148‑1 (MQ=255)                                                                agccTCCGCGCCAATCAGCTGTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGAt                                                                                    <  8:265722/146‑1 (MQ=255)                                                                    tCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCAAGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATAACTGGTGCAACGATGcag                                                                                >  4:208441/1‑147 (MQ=255)                                                                     ctgcgcCAATCAGCTTTTGGTGTTGCGCAAGTAACGCATCAGCACCAGGCTTGCGACGAGGATCAGGGGCGCGATTGACAGGATGCCGATGTTGGTAATGTCGGTTAGGTCTTTGATCTTGACCTCCATCACTGGTGCAACGTTGcgg                                                                                <  6:293071/146‑3 (MQ=255)                                                                      aGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCt                                                                              >  5:33824/1‑149 (MQ=255)                                                                         gcCAATCAGCTTTTGGGGTTGCGAACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAg                                                                           <  3:91330/149‑1 (MQ=255)                                                                             aTCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATc                                                                                                              >  5:214100/1‑110 (MQ=255)                                                                             aTCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATc                                                                                                              <  6:214100/110‑1 (MQ=255)                                                                               cAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTcc                                                                     >  4:134203/1‑149 (MQ=255)                                                                                             gcgcACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATc                                                        <  8:35237/148‑1 (MQ=255)                                                                                               gcACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACg                                                                                      <  8:14930/116‑1 (MQ=255)                                                                                               gcACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACg                                                                                      >  7:14930/1‑116 (MQ=255)                                                                                                   gTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGcggcgg                                                 >  3:162283/1‑149 (MQ=255)                                                                                                    tAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGt                                                <  4:162283/149‑1 (MQ=255)                                                                                                     aaCGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGt                                                >  8:111771/1‑148 (MQ=255)                                                                                                     aaCGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGt                                                <  7:111771/148‑1 (MQ=255)                                                                                                           tCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTg                                         <  6:235940/149‑1 (MQ=255)                                                                                                            caccacCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGt                                                                                                                                        <  5:63308/53‑1 (MQ=255)                                                                                                            caccacCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGt                                                                                                                                        >  6:63308/1‑53 (MQ=255)                                                                                                             accaccAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTgg                                        <  3:134203/148‑1 (MQ=255)                                                                                                              ccaccaGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCa                                      <  3:316609/149‑1 (MQ=255)                                                                                                                 ccaGGCATGCGACCAGGATCAGCGGCGCGATTGACAgcatgcctggtggtgatgcgttacgtgcgcaaccccaaaagctgattggcgctgagtcttcgaacaacaacaagaataagcacaaggcataccaatgatcgtgatctttcg                                     <  1:10638‑M2/147‑112 (MQ=255)                                                                                                                 ccaGGCATGCGACCAGGATCAGCGGCGCGATTGACAgcatgcctggtggtgatgcgttacgtgcgcaaccccaaaagctgattggcgctgagtcttcgaacaacaacaagaataagcacaaggcataccaatgatcgtgatctttcg                                     >  2:10638‑M2/1‑36 (MQ=255)                                                                                                                  caGGCATGCGACCAGGATCAGCGGCGCGATTGACAgcatgcctggtggtgatgcgttacgtgcgcaaccccaaaagctgattggcgctgagtcttcgaacaacaacaagaataagcacaaggcataccaatgatcgtgatctttcggc                                   <  1:352245‑M2/148‑114 (MQ=255)                                                                                                                   aGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGc                                 <  6:33824/149‑1 (MQ=255)                                                                                                                    ggCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGc                                 >  6:352396/1‑148 (MQ=255)                                                                                                                     gCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCgcggcg                                                  <  1:97576/130‑1 (MQ=255)                                                                                                                     gCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCgcggcg                                                  >  2:97576/1‑130 (MQ=255)                                                                                                                        tGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTgg                                        >  3:22820/1‑137 (MQ=255)                                                                                                                        tGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTgg                                        <  4:22820/137‑1 (MQ=255)                                                                                                                           gACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGCCAGcccc                          >  1:185896/1‑148 (MQ=255)                                                                                                                                ggATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGCCAGCCCCGAGAAc                    >  7:185686/1‑149 (MQ=255)                                                                                                                                               ttGACAGCATGCCCATGTAGTTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACTATGCCGCTCAGCTGTCCGACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGCCAGCCCCGAGAACGTCGACTGTGGAATg     <  3:208441/149‑1 (MQ=255)                                                                                                                                                  aCAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGCCAGCCCCGAGAACGTCGACTGTGGAATGGTc  <  8:185686/149‑1 (MQ=255)                                                                                                                                                  aCAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGCCAGCCCCGAGAACGTCGACTGTGGAATGGTc  >  8:5443/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGCCAGCCCCGAGAACGTCGACTGTGGAATGGTC  >  NC_002947/3841491‑3841784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.