New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3841612	47 (0.850)	3 (0.060)	3/242	NT	6.6%	coding (1273/1317 nt)	PP_3391	tartrate MFS transporter
	?	NC_002947	= 3841638	41 (0.780)					coding (1247/1317 nt)	PP_3391	tartrate MFS transporter

GTAAAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGCCAGCCCC  >  NC_002947/3841471‑3841760                                                                                                                                              |                                                                                                                                                     gTAAAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAgg                                                                                                                                               <  2:147682/149‑1 (MQ=255)      gcgcCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAg                                                                                                                                          >  7:277540/1‑149 (MQ=255)            agagCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGAATCACCACCAGGCATGAGACAAGGATCatcagagc                                                                                                                                    >  5:293071/1‑142 (MQ=255)                     gCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAg                                                                                                                           >  6:244692‑M2/1‑148 (MQ=255)                           cTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAgcatgc                                                                                                                      >  2:226429‑M2/1‑142 (MQ=255)                              gCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCtgtcaatcgcgccgctgatcctggtcgcatgcctg                                                                                                                   <  1:352245‑M1/148‑36 (MQ=255)                                cGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCtgtcaatcgcgccgctgatcctggtcgcatgcctgg                                                                                                                  <  1:10638‑M1/147‑37 (MQ=255)                                cGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCtgtcaatcgcgccgctgatcctggtcgcatgcctgg                                                                                                                  >  2:10638‑M1/1‑111 (MQ=255)                                  aaaGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACa                                                                                                                            <  8:256785/135‑1 (MQ=255)                                  aaaGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAg                                                                                                              <  6:25671/149‑1 (MQ=255)                                  aaaGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGAGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACa                                                                                                                            >  7:256785/1‑135 (MQ=255)                                                  ggTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGt                                                                                              >  4:316609/1‑149 (MQ=255)                                                        ccTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTg                                                                                         <  1:356718/148‑1 (MQ=255)                                                                ttATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCAATGTAGGTACTGTCGGTAAGGTCATTGATCTTGcc                                                                                 >  5:36566/1‑148 (MQ=255)                                                                 tATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCcca                                                                               >  7:124306/1‑149 (MQ=255)                                                                     cTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCccacca                                                                            <  8:277540/148‑1 (MQ=255)                                                                     cTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCAt                                                                           >  6:227327/1‑149 (MQ=255)                                                                         ttgttgttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCAc                                                                        <  6:36566/148‑1 (MQ=255)                                                                            ttgttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGt                                                                    >  7:35237/1‑149 (MQ=255)                                                                            ttgttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGt                                                                    >  5:235940/1‑149 (MQ=255)                                                                              gttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAg                                                                                                                                          >  6:105470/1‑77 (MQ=255)                                                                              gttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAg                                                                                                                                          <  8:312043/77‑1 (MQ=255)                                                                              gttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAg                                                                                                                                          >  7:312043/1‑77 (MQ=255)                                                                              gttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAg                                                                                                                                          <  5:105470/77‑1 (MQ=255)                                                                               ttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTgg                                                                     <  3:311548/145‑1 (MQ=255)                                                                               ttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTgg                                                                     >  4:311548/1‑145 (MQ=255)                                                                               ttCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGc                                                                  >  2:312580/1‑148 (MQ=255)                                                                                 cGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCaa                                                                <  5:227327/148‑1 (MQ=255)                                                                                    agccTCCGCGCCAATCAGCTGTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGAt                                                            <  8:265722/146‑1 (MQ=255)                                                                                        tCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCAAGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATAACTGGTGCAACGATGcag                                                        >  4:208441/1‑147 (MQ=255)                                                                                         ctgcgcCAATCAGCTTTTGGTGTTGCGCAAGTAACGCATCAGCACCAGGCTTGCGACGAGGATCAGGGGCGCGATTGACAGGATGCCGATGTTGGTAATGTCGGTTAGGTCTTTGATCTTGACCTCCATCACTGGTGCAACGTTGcgg                                                        <  6:293071/146‑3 (MQ=255)                                                                                          aGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCt                                                      >  5:33824/1‑149 (MQ=255)                                                                                             gcCAATCAGCTTTTGGGGTTGCGAACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAg                                                   <  3:91330/149‑1 (MQ=255)                                                                                                 aTCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATc                                                                                      >  5:214100/1‑110 (MQ=255)                                                                                                 aTCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATc                                                                                      <  6:214100/110‑1 (MQ=255)                                                                                                   cAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTcc                                             >  4:134203/1‑149 (MQ=255)                                                                                                                 gcgcACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATc                                <  8:35237/148‑1 (MQ=255)                                                                                                                   gcACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACg                                                              <  8:14930/116‑1 (MQ=255)                                                                                                                   gcACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACg                                                              >  7:14930/1‑116 (MQ=255)                                                                                                                       gTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGcggcgg                         >  3:162283/1‑149 (MQ=255)                                                                                                                        tAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGt                        <  4:162283/149‑1 (MQ=255)                                                                                                                         aaCGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGt                        >  8:111771/1‑148 (MQ=255)                                                                                                                         aaCGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGt                        <  7:111771/148‑1 (MQ=255)                                                                                                                               tCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTg                 <  6:235940/149‑1 (MQ=255)                                                                                                                                caccacCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGt                                                                                                                <  5:63308/53‑1 (MQ=255)                                                                                                                                caccacCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGt                                                                                                                >  6:63308/1‑53 (MQ=255)                                                                                                                                 accaccAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTgg                <  3:134203/148‑1 (MQ=255)                                                                                                                                  ccaccaGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCa              <  3:316609/149‑1 (MQ=255)                                                                                                                                     ccaGGCATGCGACCAGGATCAGCGGCGCGATTGACAgcatgcctggtggtgatgcgttacgtgcgcaaccccaaaagctgattggcgctgagtcttcgaacaacaacaagaataagcacaaggcataccaatgatcgtgatctttcg             <  1:10638‑M2/147‑112 (MQ=255)                                                                                                                                     ccaGGCATGCGACCAGGATCAGCGGCGCGATTGACAgcatgcctggtggtgatgcgttacgtgcgcaaccccaaaagctgattggcgctgagtcttcgaacaacaacaagaataagcacaaggcataccaatgatcgtgatctttcg             >  2:10638‑M2/1‑36 (MQ=255)                                                                                                                                      caGGCATGCGACCAGGATCAGCGGCGCGATTGACAgcatgcctggtggtgatgcgttacgtgcgcaaccccaaaagctgattggcgctgagtcttcgaacaacaacaagaataagcacaaggcataccaatgatcgtgatctttcggc           <  1:352245‑M2/148‑114 (MQ=255)                                                                                                                                       aGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGc         <  6:33824/149‑1 (MQ=255)                                                                                                                                        ggCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGc         >  6:352396/1‑148 (MQ=255)                                                                                                                                         gCATGCtgtcaatcgcgccgctgatcctggtcgcatgcctggtggtgatgcgttacgtgcgcaaccccaaaagctgattggcgctgagtcttcgaacaacaacaagaataagcacaaggcataccaatgatcgtgatctttcggcgag        >  2:226429‑M1/1‑6 (MQ=255)                                                                                                                                         gCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCgcggcg                          >  2:97576/1‑130 (MQ=255)                                                                                                                                         gCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCgcggcg                          <  1:97576/130‑1 (MQ=255)                                                                                                                                            tGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTgg                >  3:22820/1‑137 (MQ=255)                                                                                                                                            tGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTgg                <  4:22820/137‑1 (MQ=255)                                                                                                                                              ctgtcaatcgcgccgctgatcctggtcgcatgcctggtggtgatgcgttacgtgcgcaaccccaaaagctgattggcgctgagtcttcgaacaacaacaagaataagcacaaggcataccaatgatcgtgatctttcggcgagcatcgc  >  6:244692‑M1/1‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                     GTAAAGCGCCGAGAGCACCAGCGATGCTCGCCGAAAGATCACGATCATTGGTATGCCTTGTGCTTATTCTTGTTGTTGTTCGAAGACTCAGCGCCAATCAGCTTTTGGGGTTGCGCACGTAACGCATCACCACCAGGCATGCGACCAGGATCAGCGGCGCGATTGACAGCATGCCCATGTAGGTACTGTCGGTAAGGTCATTGATCTTGCCCACCATCACTGGTGCAACGATGCCGCTCAGCTGTCCCACCGAGTTGATCGCGGCGGTGCCGGTGGCAATTGCCAGCCCC  >  NC_002947/3841471‑3841760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.