| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3864820 | 51 (0.920) | 5 (0.100) | 4/236 | NT | 9.5% | coding (825/1320 nt) | PP_3414 | methyl‑accepting chemotaxis transducer/sensory box protein |
| ? | NC_002947 | = 3864855 | 48 (0.940) | coding (790/1320 nt) | PP_3414 | methyl‑accepting chemotaxis transducer/sensory box protein | |||||
GTCAGCACAATCTGCCCGATCACATCCGACTGCCTGTTTACCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3864668‑3864820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtctgcaccCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTATCGACGCGG < NC_002947/3864855‑3864708 GTCAGCACAATCTGCCCGATCACATCCGACTGCCTGTTTACCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTG < 1:87790/149‑1 TCAGCACAATCTGCCCGATCACATCCGACTGCCTGTTTACCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTG > 2:150898/1‑148 TCAGCACAATCTGCCCGATCACATCCGACTGCCTGTTTACCGCGTCGACACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGC < 2:122049/149‑1 CAGCACAATCTGCCCGATCACATCCGACTGCCTGTTTACCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCA > 4:280328/1‑149 TGCCCGATCACATCCGACTGCCTGTTTACCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGC < 1:318899/138‑1 TGCCCGATCACATCCGACTGCCTGTTTACCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGC > 2:318899/1‑138 CATCCGACTGCCTGTTTACCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGC > 8:181584/1‑128 CATCCGACTGCCTGTTTACCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGC < 7:181584/128‑1 ATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGAC < 8:137755/149‑1 ATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGAC > 7:137755/1‑149 ATACTGCGCGCAGCGTCGATAAGCTCCTCGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGAC < 6:185824/149‑1 CACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGC < 2:92751/83‑1 CACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGC > 1:92751/1‑83 GGTCTGCACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTA > 1:150898/1‑149 CACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTATCGACG < 3:273737/149‑1 ACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTATCGACGC > 5:203449/1‑149 ACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTATCGACGC > 5:361686/1‑149 ACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTATCGACGC > 4:180236/1‑149 ACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTATCGACGC > 8:110762/1‑149 ACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGC < 5:165096/106‑1 ACCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGC > 6:165096/1‑106 CCCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTATCGACGCG < 7:177897/149‑1 CCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTATCGACGCGG > 3:206490/1‑149 GTCAGCACAATCTGCCCGATCACATCCGACTGCCTGTTTACCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCTGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3864668‑3864820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtctgcaccCAGCAAAGCGCCGCCCATGCCGCCCATGCCAGCTCGGTGCAGACCGATGCCTGCGCGCGCAAGGGGACCGAAGTGGTGCAGCAGGCGGTGCAGGTAATCGAGCAGATTTCCCAGGAGCTTAACGACGCTGCGCGCAGTATCGACGCGG < NC_002947/3864855‑3864708 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |