New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3864820	51 (0.920)	5 (0.100)	4/236	NT	9.5%	coding (825/1320 nt)	PP_3414	methyl‑accepting chemotaxis transducer/sensory box protein
	?	NC_002947	= 3864855	48 (0.940)					coding (790/1320 nt)	PP_3414	methyl‑accepting chemotaxis transducer/sensory box protein

CCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGACGCGTTCGAAGCGGTGCGAGTGGTATTC  >  NC_002947/3864708‑3865002                                                                                                                                                      |                                                                                                                                                     ccGCGTCGTTACTGGTCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGTTTAGCTTCACGGCCTGC‑TGCACCACTTCGGTCCGCTTGCGCGCGCAGGCATCGGTGTGCACCGAGCTTGCATGGGCGGCTTGGGCGGCG‑CTTTGCTgt                                                                                                                                                     <  3:107843/149‑2 (MQ=255) ccGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGg                                                                                                                                                     >  3:206490‑M2/1‑148 (MQ=255)  cgcgTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGgg                                                                                                                                                    <  7:177897‑M2/149‑3 (MQ=255)   gcgTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggt                                                                                                                                                   >  5:361686‑M2/1‑146 (MQ=255)   gcgTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggt                                                                                                                                                   >  4:180236‑M2/1‑146 (MQ=255)   gcgTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggt                                                                                                                                                   >  5:203449‑M2/1‑146 (MQ=255)   gcgTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggt                                                                                                                                                   >  8:110762‑M2/1‑146 (MQ=255)    cgTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggtg                                                                                                                                                  <  3:273737‑M2/149‑5 (MQ=255)          tACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggtgcagacc                                                                                                                                            >  1:150898‑M2/1‑139 (MQ=255)              gcgcgcAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGCAGGCACCACTTCGGTCCCCTTGCGCGCGAAGGCAACGGTATGCACCGAGATGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGTTGCAGACCTGa                                                                                                                                         >  1:277292/1‑149 (MQ=255)               cgcgcAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGa                                                                                                                                         <  2:256881/147‑1 (MQ=255)                gcgcAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATgg                                                                                                                                      >  2:68624/1‑149 (MQ=255)                     gCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGAt                                                                                                                                 <  3:302033/149‑1 (MQ=255)                          gtTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATgg                                                                                                                                      >  6:329584/1‑139 (MQ=255)                          gtTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATgg                                                                                                                                      <  5:329584/139‑1 (MQ=255)                                 tCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCaaa                                                                                                                     >  1:40482/1‑149 (MQ=255)                                   cTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACt                                                                                                                   <  2:205927/149‑1 (MQ=255)                                      ggAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACtt                                                                                                                  <  4:273737/147‑1 (MQ=255)                                      ggAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGa                                                                                                                <  2:277292/149‑1 (MQ=255)                                       gAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGAc                                                                                                               <  2:198286/149‑1 (MQ=255)                                           tCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACt                                                                                                           >  5:214895/1‑149 (MQ=255)                                             tGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACttt                                                                                                         >  2:9707/1‑149 (MQ=255)                                              gCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggt                                                                                                                                                   >  6:165096‑M2/1‑103 (MQ=255)                                              gCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggt                                                                                                                                                   <  5:165096‑M2/106‑4 (MQ=255)                                               cTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACtt                                                                                                          <  5:194891/146‑1 (MQ=255)                                                tCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTc                                                                                                                              <  8:59495/125‑1 (MQ=255)                                                tCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTc                                                                                                                              >  7:59495/1‑125 (MQ=255)                                                  gATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGca                                                                                                      >  4:332271/1‑147 (MQ=255)                                                       ccTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAggcgg                                                                                               >  2:191943/1‑149 (MQ=255)                                                        cTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAggcggc                                                                                              <  8:177897/149‑1 (MQ=255)                                                        cTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAggcggc                                                                                              >  7:256490/1‑149 (MQ=255)                                                        cTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAggcggc                                                                                              >  4:348773/1‑149 (MQ=255)                                                          gCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGccc                                                                                            >  8:336656/1‑149 (MQ=255)                                                            aCCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCtt                                                                                          <  5:45266/149‑1 (MQ=255)                                                                   gc‑tgcACCACTTCGGTCCCCTTGCGCGCGCAGGCTTCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAAc                                                                                                                    <  5:177270/116‑1 (MQ=255)                                                                   gc‑tgcACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAAc                                                                                                                    >  6:177270/1‑116 (MQ=255)                                                                          ccacTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATc                                                                             <  3:332271/149‑1 (MQ=255)                                                                                 ggTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGt                                                                      <  8:256490/149‑1 (MQ=255)                                                                                     cccTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGAt                                                                                                                                 <  6:80685/86‑1 (MQ=255)                                                                                     cccTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGAt                                                                                                                                 >  5:80685/1‑86 (MQ=255)                                                                                     acgctGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTagg‑a                                                                 <  7:241310/145‑1 (MQ=255)                                                                                      ccTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTagg‑ag                                                                <  1:191943/149‑1 (MQ=255)                                                                                      ccTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTagg‑ag                                                                >  5:60706/1‑149 (MQ=255)                                                                                       cTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTagg‑cgg                                                               >  8:195808/1‑149 (MQ=255)                                                                                                     cATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACg                                                 <  1:68624/149‑1 (MQ=255)                                                                                                      aTCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCt                                                                                           <  4:21362/107‑1 (MQ=255)                                                                                                      aTCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCt                                                                                           >  3:21362/1‑107 (MQ=255)                                                                                                      aTCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACgg                                                >  4:191663/1‑149 (MQ=255)                                                                                                          gTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCGTCTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCt                                             >  1:59450/1‑149 (MQ=255)                                                                                                          gTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggtgcagaccgatgcctgcgcgcgcaaggggaccgaagtggtgcagcaggcggtgcaggtaatcgagcagatttccgaggagcttatcgacgctgcgcgcagtat                                             <  6:185824‑M2/149‑106 (MQ=255)                                                                                                          gTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggtgcagaccgatgcctgcgcgcgcaaggggaccgaagtggtgcagcaggcggtgcaggtaatcgagcagatttcccaggagcttaacgacgctgcgcgcagtat                                             <  8:137755‑M2/149‑106 (MQ=255)                                                                                                          gTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggtgcagaccgatgcctgcgcgcgcaaggggaccgaagtggtgcagcaggcggtgcaggtaatcgagcagatttcccaggagcttaacgacgctgcgcgcagtat                                             >  7:137755‑M2/1‑44 (MQ=255)                                                                                                              gCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggtgcagaccgatgcctgcgcgcgcaaggggaccgaagtggtg                                                                                                           >  1:92751‑M2/1‑40 (MQ=255)                                                                                                              gCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGggtgcagaccgatgcctgcgcgcgcaaggggaccgaagtggtg                                                                                                           <  2:92751‑M2/83‑44 (MQ=255)                                                                                                                aCCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTg                                      >  6:243870/1‑149 (MQ=255)                                                                                                                aCCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTg                                      >  6:168736/1‑149 (MQ=255)                                                                                                                 ccGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGc                                     <  7:336656/149‑1 (MQ=255)                                                                                                                 ccGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGc                                     >  8:55345/1‑149 (MQ=255)                                                                                                                  cgtggtGGGATGGGGGGGATGGGCGGCG‑CTTTTCTGGGTGGAGAACTGATGGGGGATGGCGCTGGCAAACTTGACCACTTTGCACACGCGGCCCTTGCTTTCGAAGATCGGGTTGTAGGTGGGCCTCCAGAAAAACGGTCTGGCCCTGc                                     <  1:9707/144‑1 (MQ=255)                                                                                                                         gcatgggcggcatgggcgGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGAc                             <  5:168736/149‑1 (MQ=255)                                                                                                                         gcatgggcggcatgggcgGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGAc                             <  3:348773/149‑1 (MQ=255)                                                                                                                                cggcatgggcggcG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGACGCGTTc                       >  4:244110/1‑148 (MQ=255)                                                                                                                                   catgggcggcG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGACGCGTTCGAAg                   <  2:40482/149‑1 (MQ=255)                                                                                                                                   catgggcggcG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTCCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAAAGGTCTGGCCCTGGTTTTTGACTCGTTCGAAg                   >  4:221377/1‑149 (MQ=255)                                                                                                                                    atgggcggcG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCATACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGACGCGTTCGAAGc                  <  3:221377/149‑1 (MQ=255)                                                                                                                                             g‑cTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCGCAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGACGCGTTCGAAGCGGTGCGAGt         <  6:214895/149‑1 (MQ=255)                                                                                                                                                    cTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTTGCCCTGCTTGTTGACGCGTTCGAAg                   <  6:258220/133‑1 (MQ=255)                                                                                                                                                    cTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGACGCGTTCGAAg                   >  5:258220/1‑133 (MQ=255)                                                                                                                                                     tGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGACGCGTTCGAAGCGGTGCGAGTGGTATTc  >  3:127045/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CCGCGTCGATACTGCGCGCAGCGTCGTTAAGCTCCTGGGAAATCTGCTCGATTACCTGCACCGCCTGC‑TGCACCACTTCGGTCCCCTTGCGCGCGCAGGCATCGGTCTGCACCGAGCTGGCATGGGCGGCATGGGCGGCG‑CTTTGCTGGGTGCAGACCTGATGGGTGATGTCGCTGGCAAACTTGACCACTTTGCACAGGCGGCCCTTGCTGTCGAAGATCGGGTTGTAGG‑AGGCCTCCAGAAAAACGGTCTGGCCCTGCTTGTTGACGCGTTCGAAGCGGTGCGAGTGGTATTC  >  NC_002947/3864708‑3865002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.