New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4400544 =	42 (0.760)	4 (0.080)	4/246	NT	8.9%	coding (614/1272 nt)	PP_3879	HK97 family portal protein
	?	NC_002947	4400580 =	42 (0.790)					coding (578/1272 nt)	PP_3879	HK97 family portal protein

CCGCTACCCATGCGGCTGATTCATCATGTGCGCTGGCACACGAAGAACCATTACACCGGCCTCTCTCCGGTTGAGCTGCACGCCGATGCCGTAGGCCTGGCGCAGGCTGTGAGGCAGTACGCGGGCAAGTCATTTGCCAACGGCACTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4400692‑4400544 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actgcCTCACAGCCTGCGCCAGGCCTACGGCATCGGCGTGCAGCTCAACCGGAGAGAGGCCGGTGTAATGGTTCTTCGTGTGCCAGCGCACATGATGAATCAGCCGCATGGGTAGCGGGTCGTGCCCACCAACCCGGTAGACGGGGAGCAAAT  >  NC_002947/4400580‑4400727                                                                                                                                                                                                                                                                                                           CCGCTACCCATGCGGCTGATTCATCATGTGCGCTGGCACACGAAGAACCATTACACCGGCCTCTCTCCGGTTGAGCTGCACGCCGATGCCGTAGGCCTGGCGCAGGCTGTGAGGCAGTACGCGGGCAAGTCAATTGCCAACGGCACTGC                                                                                                                                                      >  7:294460/1‑149                                                                                                            TGTGAGGCAGTACGCGGGCAAGTCATTTGCCAACGGCACTGCCTCACAGCCTGCGCCAGGCCTACGGCATCGGCGTGCAGCTCAACCGGAGAGAGGCCGGTGTAATGGTTCTTCGTGTGCCAGCGCACATGATGAATCAGCCGCATGGG                                           >  7:29941/1‑149                                                                                                              TGAGGCAGTACGCGGGCAAGTCATTTGCCAACGGCACTGCCTCACAGCCTGCGCCAGGCCTACGGCATCGGCGTGCAGCTCAACCGGAGAGAGGCCGGTGTAATGGTTCTTCGTGTGCCAGCGCACATGATGA                                                         <  7:274661/133‑1                                                                                                              TGAGGCAGTACGCGGGCAAGTCATTTGCCAACGGCACTGCCTCACAGCCTGCGCCAGGCCTACGGCATCGGCGTGCAGCTCAACCGGAGAGAGGCCGGTGTAATGGTTCTTCGTGTGCCAGCGCACATGATGA                                                         >  8:274661/1‑133                                                                                                                                        GCCAACGGCACTGCCTCACAGCCTGCGCCAGGCCTACGGCATCGGCGTGCAGCTCAACCGGAGAGAGGCCGGTGTAATGGTTCTTCGTGTGCCAGCGCACATGATGAATCAGCCGCATGGGTAGCGGGTCGTGCCCACCAACCCGGTA                <  8:29941/148‑1                                                                                                                                                     CCTCACAGCCTGCGCCAGGCCTACGGCATCGGCGTGCAGCTCAACCGGAGAGAGGCCGGTGTAATGGTTCTTCGTGTGCCAGCGCACATGATGAATCAGCCGCATGGGTAGCGGGTCGTGCCCACCAACCCGGTAGACGGGGAGCAAAT  >  4:341768/1‑149                                                                                                                                                                                                                                                                                                           CCGCTACCCATGCGGCTGATTCATCATGTGCGCTGGCACACGAAGAACCATTACACCGGCCTCTCTCCGGTTGAGCTGCACGCCGATGCCGTAGGCCTGGCGCAGGCTGTGAGGCAGTACGCGGGCAAGTCATTTGCCAACGGCACTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4400692‑4400544 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actgcCTCACAGCCTGCGCCAGGCCTACGGCATCGGCGTGCAGCTCAACCGGAGAGAGGCCGGTGTAATGGTTCTTCGTGTGCCAGCGCACATGATGAATCAGCCGCATGGGTAGCGGGTCGTGCCCACCAACCCGGTAGACGGGGAGCAAAT  >  NC_002947/4400580‑4400727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.