New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5387199	39 (0.700)	3 (0.060)	3/240	NT	7.7%	coding (709/2811 nt)	dld2	D‑lactate dehydrogenase
	?	NC_002947	= 5387221	35 (0.670)					coding (731/2811 nt)	dld2	D‑lactate dehydrogenase

TTCGAAAGCAGCCACGCCGAGCTGCTGGAAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5387046‑5387199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccagcAGGTGCTGCAGGATGTCCAGCGGCTGGTCGTAGTCCACCAGTGCGTTCAGTGACAGGCCCGTGGTGTTCTTCAGCCGGTATTTGTGCCGGATGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTT  <  NC_002947/5387221‑5387074                                                                                                                                                                                                                                                                                                                TTCGAAAGCAGCCACGCCGAGCTGCTGGAAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGA                                                                                                                                                           >  7:35792/1‑149    GAAAGCAGCCACGCCGAGCTGCTGGAAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACC                                                                                                                                                         <  4:134029/148‑1                           GGAAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGA                                                                                                                                                           <  1:275284/123‑1                           GGAAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAAAGCACTGGTGGACTACGA                                                                                                                                                           >  2:275284/1‑123                                     GCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCAGGTGCTGCAGGATGTCCAGCGGCTGGTCGT                                                                                                                       <  3:165233/149‑1                                                                                                                              ACTGAACGCACTGGTGGACTACGACCAGCAGGTGCTGCAGGATGTCCAGCGGCTGGTCG                                                                                                                        >  1:355064/1‑59                                                                                                                              ACTGAACGCACTGGTGGACTACGACCAGCAGGTGCTGCAGGATGTCCAGCGGCTGGTCG                                                                                                                        <  2:355064/59‑1                                                                                                                                                    GACCAGCAGGTGCTGCAGGATGTCCAGCGGCTGGTCGTAGTCCACCAGTGCGTTCAGTGACAGGCCCGTGGTGTTCTTCAGCCGGTATTTGTGCCGGATGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCA        <  3:160348/149‑1                                                                                                                                                          CAGGTGCTGCAGGATGTCCAGCGGCTGGTCGTAGTCCACCAGTGCGTTCAGTGACAGGCCCGTGGTGTTCTTCAGCCGGTATTTGTGCCGGATGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTT  <  2:291707/149‑1                                                                                                                                                                                                                                                                                                                TTCGAAAGCAGCCACGCCGAGCTGCTGGAAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5387046‑5387199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccagcAGGTGCTGCAGGATGTCCAGCGGCTGGTCGTAGTCCACCAGTGCGTTCAGTGACAGGCCCGTGGTGTTCTTCAGCCGGTATTTGTGCCGGATGCGCTCGGCCAGCGCGGTGTTGGCGCGGGTTTCGCGGCCCAGGCGGGCCAGTGCTT  <  NC_002947/5387221‑5387074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.