New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5387199	39 (0.700)	3 (0.060)	3/240	NT	7.7%	coding (709/2811 nt)	dld2	D‑lactate dehydrogenase
	?	NC_002947	= 5387221	35 (0.670)					coding (731/2811 nt)	dld2	D‑lactate dehydrogenase

CCGAGCTGCTGGAAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGT  >  NC_002947/5387062‑5387347                                                                                                                                           |                                                                                                                                                     ccGAGCTGCTGGAAGCACTGGCCCGCCTGAGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATc                                                                                                                                           >  5:357487/1‑149 (MQ=255)  cGAGCTGCTGGAATCACTGGCCCGCCTGGGCCGCGAAACCCGCTCCAACACCGCGCTGGCCGAGCTCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTgg                                                                                                                                                <  8:308019/143‑1 (MQ=255)  cGAGCTGCTGGAAGCACTGGCCCGCCTGGGCCGAGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCATGTCACTGAACGCACTGGTGGACTAAGACCAGCCGCTgg                                                                                                                                                >  7:308019/1‑143 (MQ=255)      ctgctgGAAGCACTGGCCCTCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGTCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCAGCTGGACATCCTgca                                                                                                                                      <  8:200807/149‑1 (MQ=255)         ctgGAAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGCACGCACTGGTGGACTACGACAAGCCGCTGGCCCTCCTgcagca                                                                                                                                   >  8:230899/1‑149 (MQ=255)             aaGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTg                                                                                                                               <  2:291707‑M2/149‑2 (MQ=255)                   tGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTgctggtc                                                                                                                         <  3:160348‑M2/149‑8 (MQ=255)                     gCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCaggtgctgcaggatgtccagcggctggtcgt                                                                                                                       <  3:165233‑M1/149‑32 (MQ=255)                     gCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCgg                                                                                                                       >  5:19901/1‑149 (MQ=255)                        cGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTc                                                                                                                    <  3:25259/149‑1 (MQ=255)                              ggCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAgg                                                                                                              <  6:19901/149‑1 (MQ=255)                               gCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACACGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAgg                                                                                                              >  1:94148/1‑149 (MQ=255)                                        cccGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGc                                                                                                    <  2:94148/149‑1 (MQ=255)                                           gcgcCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTtc                                                                                                 <  3:168568/149‑1 (MQ=255)                                               cAACACCGCGCTGGTCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTtcatca                                                                                             <  3:29999/149‑1 (MQ=255)                                                         cTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCAc                                                                                   <  7:230899/149‑1 (MQ=255)                                                              cGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACg                                                                              <  6:126815/149‑1 (MQ=255)                                                                     aTCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGt                                                                       <  4:160348/149‑1 (MQ=255)                                                                       ccGGCACAAATAC‑CGGCTGAAGACCGCCACGTGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCt                                                                                                                                         <  2:55001/81‑1 (MQ=255)                                                                       ccGGCACAAATAC‑CGGCTGAAGAACGCCACGGGCCTGTCACTGACCGCACTGGTGGACTACGACCAGCCGCTGGACATCCt                                                                                                                                         >  1:55001/1‑81 (MQ=255)                                                                         ggCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTgg                                                                                                                                                >  4:193940/1‑72 (MQ=255)                                                                         ggCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTgg                                                                                                                                                <  3:193940/72‑1 (MQ=255)                                                                         ggCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGccc                                                                   >  4:235812/1‑149 (MQ=255)                                                                         ggCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGccc                                                                   >  8:69421/1‑149 (MQ=255)                                                                                       gCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGcac                                                       >  1:260843/1‑148 (MQ=255)                                                                                           aagaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGc                                                  >  1:180992/1‑149 (MQ=255)                                                                                            agaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGa                                                                 <  8:99572/133‑1 (MQ=255)                                                                                            agaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGa                                                                 >  7:99572/1‑133 (MQ=255)                                                                                             gaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGc                                                  >  4:137842/1‑147 (MQ=255)                                                                                               acacCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAgc                                              <  6:357487/149‑1 (MQ=255)                                                                                                      gggCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCctgc                                       >  8:245204/1‑149 (MQ=255)                                                                                                         ccTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTgg                                    >  6:365669/1‑149 (MQ=255)                                                                                                          cTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGgt                                   <  3:235812/149‑1 (MQ=255)                                                                                                          cTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGgt                                   <  7:69421/149‑1 (MQ=255)                                                                                                           tGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCCCCCGCCCACGGCCAGCGCCCTGCTGgtg                                  >  4:252631/1‑149 (MQ=255)                                                                                                               aCTGAACGCACTGGTGGACTACGACCAGCaggtgctgcaggatgtccagcggctggtcg                                                                                                                        <  2:355064‑M1/59‑31 (MQ=255)                                                                                                               aCTGAACGCACTGGTGGACTACGACCAGCaggtgctgcaggatgtccagcggctggtcg                                                                                                                        >  1:355064‑M1/1‑29 (MQ=255)                                                                                                               aCTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTc                               <  1:291707/148‑1 (MQ=255)                                                                                                                       cACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGtt                      >  2:354811/1‑149 (MQ=255)                                                                                                                            gtggACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGaa                   <  2:260843/147‑1 (MQ=255)                                                                                                                               gACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGcac                                                       <  7:290938/108‑1 (MQ=255)                                                                                                                               gACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGcac                                                       >  8:290938/1‑108 (MQ=255)                                                                                                                                  tACGACCAGCCGCT‑GACATCCTGCAGCCCCTGCGGGTCGGCTCCGCAGGCCCGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGCCCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCtgctgc          >  6:116468/1‑149 (MQ=255)                                                                                                                                   aCGACCAGCCGCTGGACATCCTGCAGCACCTgctggtcgtagtccaccagtgcgttcagtgacaggcccgtggtgttcttcagccggtatttgtgccggatgcgctcggccagcgcggtgttggcgcgggtttcgcggcccaggcgggc          <  3:165233‑M2/149‑119 (MQ=255)                                                                                                                                    cGACCAGCCGCTGGACATCCTGCAGCACCTgctggtcgtagtccaccagtgcgttcagt                                                                                                   <  2:355064‑M2/59‑30 (MQ=255)                                                                                                                                    cGACCAGCCGCTGGACATCCTGCAGCACCTgctggtcgtagtccaccagtgcgttcagt                                                                                                   >  1:355064‑M2/1‑30 (MQ=255)                                                                                                                                     gACCAGCaggtgctgcaggatgtccagcggctggtcgtagtccaccagtgcgttcagtgacaggcccgtggtgttcttcagccggtatttgtgccggatgcgctcggccagcgcggtgttggcgcgggtttcgcggcccaggcgggcca        <  3:160348‑M1/149‑143 (MQ=255)                                                                                                                                     gACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCcg        >  2:207270/1‑149 (MQ=255)                                                                                                                                           caggtgctgcaggatgtccagcggctggtcgtagtccaccagtgcgttcagtgacaggcccgtggtgttcttcagccggtatttgtgccggatgcgctcggccagcgcggtgttggcgcgggtttcgcggcccaggcgggccagtgctt  <  2:291707‑M1/149‑149 (MQ=255)                                                                                                                                           |                                                                                                                                                     CCGAGCTGCTGGAAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGT  >  NC_002947/5387062‑5387347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.