New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5387199	39 (0.700)	3 (0.060)	3/240	NT	7.7%	coding (709/2811 nt)	dld2	D‑lactate dehydrogenase
	?	NC_002947	= 5387221	35 (0.670)					coding (731/2811 nt)	dld2	D‑lactate dehydrogenase

AAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAAGCAGCAGCC  >  NC_002947/5387074‑5387368                                                                                                                                                     |                                                                                                                                                    aaGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTg                                                                                                                                                    <  2:291707‑M2/149‑2 (MQ=255)       tGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTgctggtc                                                                                                                                              <  3:160348‑M2/149‑8 (MQ=255)         gCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCgg                                                                                                                                            >  5:19901/1‑149 (MQ=255)            cGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTc                                                                                                                                         <  3:25259/149‑1 (MQ=255)                  ggCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAgg                                                                                                                                   <  6:19901/149‑1 (MQ=255)                   gCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACACGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAgg                                                                                                                                   >  1:94148/1‑149 (MQ=255)                            cccGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGc                                                                                                                         <  2:94148/149‑1 (MQ=255)                               gcgcCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTtc                                                                                                                      <  3:168568/149‑1 (MQ=255)                                   cAACACCGCGCTGGTCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTtcatca                                                                                                                  <  3:29999/149‑1 (MQ=255)                                             cTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCAc                                                                                                        <  7:230899/149‑1 (MQ=255)                                                  cGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACg                                                                                                   <  6:126815/149‑1 (MQ=255)                                                         aTCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGt                                                                                            <  4:160348/149‑1 (MQ=255)                                                             ggCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGccc                                                                                        >  8:69421/1‑149 (MQ=255)                                                             ggCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGccc                                                                                        >  4:235812/1‑149 (MQ=255)                                                                           gCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGcac                                                                            >  1:260843/1‑148 (MQ=255)                                                                               aagaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGc                                                                       >  1:180992/1‑149 (MQ=255)                                                                                agaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGa                                                                                      <  8:99572/133‑1 (MQ=255)                                                                                agaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGa                                                                                      >  7:99572/1‑133 (MQ=255)                                                                                 gaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGc                                                                       >  4:137842/1‑147 (MQ=255)                                                                                   acacCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAgc                                                                   <  6:357487/149‑1 (MQ=255)                                                                                          gggCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCctgc                                                            >  8:245204/1‑149 (MQ=255)                                                                                             ccTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTgg                                                         >  6:365669/1‑149 (MQ=255)                                                                                              cTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGgt                                                        <  7:69421/149‑1 (MQ=255)                                                                                              cTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGgt                                                        <  3:235812/149‑1 (MQ=255)                                                                                               tGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCCCCCGCCCACGGCCAGCGCCCTGCTGgtg                                                       >  4:252631/1‑149 (MQ=255)                                                                                                   aCTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTc                                                    <  1:291707/148‑1 (MQ=255)                                                                                                           cACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGtt                                           >  2:354811/1‑149 (MQ=255)                                                                                                                gtggACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGaa                                        <  2:260843/147‑1 (MQ=255)                                                                                                                   gACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGcac                                                                            >  8:290938/1‑108 (MQ=255)                                                                                                                   gACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGcac                                                                            <  7:290938/108‑1 (MQ=255)                                                                                                                      tACGACCAGCCGCT‑GACATCCTGCAGCCCCTGCGGGTCGGCTCCGCAGGCCCGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGCCCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCtgctgc                               >  6:116468/1‑149 (MQ=255)                                                                                                                       aCGACCAGCCGCTGGACATCCTGCAGCACCTgctggtcgtagtccaccagtgcgttcagtgacaggcccgtggtgttcttcagccggtatttgtgccggatgcgctcggccagcgcggtgttggcgcgggtttcgcggcccaggcgggc                               <  3:165233‑M2/149‑119 (MQ=255)                                                                                                                        cGACCAGCCGCTGGACATCCTGCAGCACCTgctggtcgtagtccaccagtgcgttcagt                                                                                                                        >  1:355064‑M2/1‑30 (MQ=255)                                                                                                                        cGACCAGCCGCTGGACATCCTGCAGCACCTgctggtcgtagtccaccagtgcgttcagt                                                                                                                        <  2:355064‑M2/59‑30 (MQ=255)                                                                                                                         gACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCcg                             >  2:207270/1‑149 (MQ=255)                                                                                                                                 gCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTAc                     <  7:245204/149‑1 (MQ=255)                                                                                                                                  cTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTAcc                    >  6:298149/1‑149 (MQ=255)                                                                                                                                    ggACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCg                  >  3:39824/1‑149 (MQ=255)                                                                                                                                       cATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCTGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGc               <  8:35792/149‑1 (MQ=255)                                                                                                                                       cATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGc               <  4:39824/149‑1 (MQ=255)                                                                                                                                       cATCCTGCAGCACCTGCTGGGCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGc               <  3:252631/149‑1 (MQ=255)                                                                                                                                                gcaCCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAagcag       >  5:94741/1‑148 (MQ=255)                                                                                                                                                 caCCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCt              <  4:345219/140‑1 (MQ=255)                                                                                                                                                 caCCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCt              >  3:345219/1‑140 (MQ=255)                                                                                                                                                    ctgctgGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAAGCAGCAGcc  >  8:328258/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AAGCACTGGCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATAC‑CGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGACCACCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAAGCAGCAGCC  >  NC_002947/5387074‑5387368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.