New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5661040	37 (0.670)	5 (0.100)	5/236	NT	12.0%	coding (665/1701 nt)	ligB	DNA ligase B
	?	NC_002947	= 5661069	39 (0.760)					coding (694/1701 nt)	ligB	DNA ligase B

CCCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5660883‑5661040 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgttGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCG  <  NC_002947/5661069‑5660925                                                                                                                                                                                                                                                                                                                 CCCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTAT                                                                                                                                                            >  5:95668/1‑149  CCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATC                                                                                                                                                           >  5:58053/1‑149                                              CTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGC                                                                                                                                                        >  7:217287/1‑108                                              CTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGC                                                                                                                                                        <  8:217287/108‑1                                                 GACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCG                                                                                                             <  7:71456/148‑1                                                        ATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAA                                                                                                                    >  7:22681/1‑134                                                        ATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAA                                                                                                                    <  8:22681/134‑1                                                                        AGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGC                                                                                                   <  5:272117/135‑1                                                                        AGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGC                                                                                                   >  6:272117/1‑135                                                                                                                                                       GGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTC        >  5:239122/1‑147                                                                                                                                                           TGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCG  >  8:229149/1‑149                                                                                                                                                            GTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCG  >  2:115510/1‑148                                                                                                                                                             TTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCG  >  1:30169/1‑147                                                                                                                                                                                                                                                                                                                 CCCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5660883‑5661040 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgttGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCG  <  NC_002947/5661069‑5660925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.