New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 341039	53 (0.960)	5 (0.090)	4/244	NT	8.8%	coding (68/177 nt)	PP_5438	hypothetical protein
	?	NC_002947	= 341063	53 (1.000)					coding (44/177 nt)	PP_5438	hypothetical protein

GGCCTTCCTGGCGTGCGCCAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCACCCACGAATGCCATGTTGATATCACAAGGTTGTACCCA  >  NC_002947/340894‑341186                                                                                                                                                  |                                                                                                                                                     ggcCTTCCTGGCGTGCGCCAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCagag                                                                                                                                                   >  6:43112/1‑149 (MQ=255)    cTTCCTGGCGTGCGCCAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAtcgcgc                                                                                                                                                >  4:217028‑M1/1‑143 (MQ=255)     ttCCTGGCGTGCGCCAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCtt                                                                                                                                               >  7:179866/1‑149 (MQ=255)       ccTGGCGTGCGCCAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTtg                                                                                                                                              <  8:285326/148‑1 (MQ=255)           gCGTGCGCCAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTtgatg‑a                                                                                                                                         <  8:320365/148‑1 (MQ=255)                 gcCAAGCTAGCATAGCGGCATTATCACGGCCAACAGGGTCGCCGGGGACTGTGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCATGATG‑aactacgg                                                                                                                                  >  6:298022/1‑143 (MQ=255)                  ccAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGgc                                                                                                                                 <  4:121721/149‑1 (MQ=255)                   cAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGgc                                                                                                                                 <  4:151162/148‑1 (MQ=255)                   cAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGgc                                                                                                                                 >  3:151162/1‑148 (MQ=255)                   cAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCC‑GGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGgcgc                                                                                                                               >  8:139855/1‑149 (MQ=255)                          gCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGgcgc                                                                                                                               >  2:293123/1‑143 (MQ=255)                          gCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCCCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGgcgc                                                                                                                               <  1:293123/143‑1 (MQ=255)                            aTAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGAtggtgc                                                                                                                       <  2:223475‑M2/149‑7 (MQ=255)                               gCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAtcgcgccttttttcatcaaggctctggtgctgg                                                                                                                     <  5:243121‑M1/149‑34 (MQ=255)                               gCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAtcgcgccttttttcatcaaggctctggtgctg                                                                                                                      <  3:217028‑M1/148‑33 (MQ=255)                               gCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGAtggtgacag                                                                                                                    <  5:105069‑M2/149‑10 (MQ=255)                                cGGCATTATGACGGCCAACAGGGTCGCCGGGGACGGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAtcgcgccttttttcatcaaggctctggtgctgg                                                                                                                     <  4:30140‑M1/148‑34 (MQ=255)                                cGGCATTATGACGGCCAACAGGGTCGCCGGGGACGGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAtcgcgccttttttcatcaaggctctggtgctgg                                                                                                                     >  3:30140‑M1/1‑115 (MQ=255)                                   ctttATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCttt                                                                                                                <  7:235299/147‑1 (MQ=255)                                    aTTATGACGGCCAACAGGGGCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTGGTCGCATCGCTACAGCGTAACGTCGCGCATATGGCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTg                                                                                                               <  2:59627/149‑1 (MQ=255)                                           cGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGGAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATGCAAAAAAGGCGCGATGGTGCCAGCTTTGGCCgg                                                                                                          <  1:223475/148‑1 (MQ=255)                                              ccAACAGGGTCGCCGGGGACTGGGGGCACTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCAt                                                                                                     <  8:147197/149‑1 (MQ=255)                                                aaCAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATg                                                                                                    >  8:176978/1‑148 (MQ=255)                                                 aCAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCgg                                                                                                          >  5:131635/1‑141 (MQ=255)                                                 aCAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCgg                                                                                                          <  6:131635/141‑1 (MQ=255)                                                  cAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATgg                                                                                                   >  1:13419/1‑147 (MQ=255)                                                          ccGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGtttt                                                                                         <  2:13419/149‑1 (MQ=255)                                                                   gggggCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGAc                                                                                      >  6:75062/1‑143 (MQ=255)                                                                   gggggCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGAc                                                                                      <  5:75062/143‑1 (MQ=255)                                                                    ggggCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTg                                                                                <  7:139855/148‑1 (MQ=255)                                                                    ggggCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTg                                                                                <  5:43112/148‑1 (MQ=255)                                                                      ggCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAg                                                                             <  7:176978/149‑1 (MQ=255)                                                                      ggCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAg                                                                             >  8:256070/1‑149 (MQ=255)                                                                       gcgcTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAgg                                                                            >  4:112745/1‑149 (MQ=255)                                                                                  gCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTg                                                                                                               <  3:61760/103‑1 (MQ=255)                                                                                  gCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTg                                                                                                               >  4:61760/1‑103 (MQ=255)                                                                                   cAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGAc                                                                <  3:112745/149‑1 (MQ=255)                                                                                     gTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCt                                                              >  6:273569/1‑149 (MQ=255)                                                                                         gTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGa                                                                                       >  1:188517/1‑120 (MQ=255)                                                                                         gTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGa                                                                                       <  2:188517/120‑1 (MQ=255)                                                                                            gCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGAc                                                                                      <  5:251104/118‑1 (MQ=255)                                                                                            gCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGAc                                                                                      >  6:251104/1‑118 (MQ=255)                                                                                              aTCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGt                                                     >  3:5206/1‑149 (MQ=255)                                                                                                  cTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCg                                                                  >  4:141248/1‑132 (MQ=255)                                                                                                  cTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCg                                                                  <  3:141248/132‑1 (MQ=255)                                                                                                     cAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTaa                                                <  7:256070/147‑1 (MQ=255)                                                                                                       gCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACggg                                            <  8:126638/149‑1 (MQ=255)                                                                                                        cGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACGCATTGGAGGGGTAAACCCGACGTTTTGCCAGTGCTAACGGGt                                           >  6:287569/1‑149 (MQ=255)                                                                                                          tAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGcc                                                                                                                                                 <  5:243319/46‑1 (MQ=255)                                                                                                          tAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGcc                                                                                                                                                 >  6:243319/1‑46 (MQ=255)                                                                                                             cGTCGCGCAGATGTCCTCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCAcc                                      <  4:5206/149‑1 (MQ=255)                                                                                                                    cAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCACCCACGAAt                               >  3:239345/1‑149 (MQ=255)                                                                                                                          tCCGCGAAGGAGTCGCCCAGCACCAGAGCCTAGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAACCCCGACCTTTTGCCAGAGCTAACGGGTTCACCCACTAATGCCATg                         >  5:247147/1‑149 (MQ=255)                                                                                                                            cgcgAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGt                                                                         <  3:138588/99‑1 (MQ=255)                                                                                                                            cgcgAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGt                                                                         >  4:138588/1‑99 (MQ=255)                                                                                                                                      tCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGTAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCACCCGCGAATGCCa                           <  6:332375/135‑1 (MQ=255)                                                                                                                                      tCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGTAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCACCCGCGAATGCCa                           >  5:332375/1‑135 (MQ=255)                                                                                                                                        gCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCACCCACGAATGCCATGTTGATATCACAAg            <  5:273569/148‑1 (MQ=255)                                                                                                                                          ctgtcaccatcgcgccttttttcatcaaggctctggtgctgggcgacaccttcgcggacatctgcgcgacgttacgctgtagcgatgcgacaaactgccccaccagcgcccccagtccccggcgaccctgttggccgtcataatgccgc          <  5:105069‑M1/145‑141 (MQ=255)                                                                                                                                          ccAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGAtggtgctgggcgacaccttcgcggacatctgcgcgacgttacgctgtagcgatgcgacaaactgccccaccagcgccccccgtccccggcgaccctgttggccgtcataatgccg          <  4:30140‑M2/148‑116 (MQ=255)                                                                                                                                          ccAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGAtggtgctgggcgacaccttcgcggacatctgcgcgacgttacgctgtagcgatgcgacaaactgccccaccagcgccccccgtccccggcgaccctgttggccgtcataatgccg          >  3:30140‑M2/1‑33 (MQ=255)                                                                                                                                          ccAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGAtggtgctgggcgacaccttcgcggacatctgcgcgacgttacgctgtagcgatgcgacaaactgccccaccagcgcccccagtccccggcgaccctgttggccgtcataatgccgc         <  5:243121‑M2/149‑117 (MQ=255)                                                                                                                                          ccAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCACCCACGAATGCCATGTTGATATCACAAGGtt         >  6:130717/1‑149 (MQ=255)                                                                                                                                          ccAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCACCCACGAATGCCATGTTGATATCACAAGGtt         >  2:67814/1‑149 (MQ=255)                                                                                                                                          ccAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTCCCAGTGCTAACGGGTTCACCCACGAATGCCATGTTGATATCACAAGGtt         >  6:81621/1‑149 (MQ=255)                                                                                                                                           cAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGAtggtgctgggcgacaccttcgcggacatctgcgcgacgttacgctgtagcgatgcgacaaactgccccaccagcgcccccagtccccggcgaccctgttggccgtcataatgccgc         <  3:217028‑M2/148‑117 (MQ=255)                                                                                                                                           cAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGt                                           <  6:38309/114‑1 (MQ=255)                                                                                                                                           cAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGt                                           >  5:38309/1‑114 (MQ=255)                                                                                                                                             gCACCAtcgcgccttttttcatcaaggctctggtgctgggcgacaccttcgcggacatctgcgcgacgttacgctgtagcgatgcgacaaactgccccaccagcgcccccagtccccggcgaccctgttggccgtcataatgccgctat       <  2:223475‑M1/149‑144 (MQ=255)                                                                                                                                                 cAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCACCCACGAATGCCATGTTGATATCACAAGGTTGTACCCa  >  8:33395/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GGCCTTCCTGGCGTGCGCCAAGCTAGCATAGCGGCATTATGACGGCCAACAGGGTCGCCGGGGACTGGGGGCGCTGGTGGGGCAGTTTGTCGCATCGCTACAGCGTAACGTCGCGCAGATGTCCGCGAAGGTGTCGCCCAGCACCAGAGCCTTGATG‑AAAAAAGGCGCGATGGTGCCAGCTTTGGCCGGCTCATGGAAGCTGTTTTGACCCATTGGAGGGGTAAACCCGACCTTTTGCCAGTGCTAACGGGTTCACCCACGAATGCCATGTTGATATCACAAGGTTGTACCCA  >  NC_002947/340894‑341186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.