New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	364566 =	59 (1.070)	3 (0.060)	3/234	NT	5.4%	intergenic (‑33/+91)	PP_0303/caiX	dehydrocarnitine cleavage enzyme/carnitine uptake ABC transporter substrate‑binding protein
	?	NC_002947	364649 =	51 (1.010)					intergenic (‑116/+8)	PP_0303/caiX	dehydrocarnitine cleavage enzyme/carnitine uptake ABC transporter substrate‑binding protein

CGGCCTCTACGGCGGATTCGGCGATCTGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCA  >  NC_002947/364419‑364712                                                                                                                                                     |                                                                                                                                                   cggcCTCTACGGCGGATTCGGCGATCTGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCtttt                                                                                                                                                   <  5:285318/149‑1 (MQ=255)      gaccacaaggacgcgctggaatcagcccgccagtggctcaaggaccaccccgaggacaaggcccgctggcttgagggtgtgaccaccttcgatggcaagccggctgcggacaacctcaagcttaccgccaactgacagggcccTTTcgc                                                                                                                                               >  8:158126‑M1/144‑149 (MQ=255)         cacaaggacgcgctggaatcagcccgccagtggctcaaggaccaccccgaggacaaggcccgctggcttgagggtgtgaccaccttcgatggcaagccggctgcggagaacctcaagcttaccgccaactgacagggcccTTTCGCggg                                                                                                                                            <  5:312090‑M1/9‑1 (MQ=255)           ggcggATTCGGCGATCTGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCAt                                                                                                                                         >  1:10037/1‑149 (MQ=255)                 ttCGGCGATCTGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGc                                                                                                                                   >  1:185645/1‑149 (MQ=255)                    ggCGATCTGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTcc                                                                                                                                >  1:76184/1‑149 (MQ=255)                       gATCTGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCca                                                                                                                              >  3:21460/1‑148 (MQ=255)                        aTCTGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTAAAGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTAGCCGGGATGCCCGCTCCcaca                                                                                                                            >  2:323536/1‑149 (MQ=255)                         tCTGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGAGAGGGCGCAGGTGATGATTACGTCGTGGTTCATGGTGCAGATACTTCTGATG‑TCGGTGTTGGCTTTTTCGCGGCCATGCCCGCTCCCACAg                                                                                                                           >  4:145593/1‑149 (MQ=255)                           tGTTTGTGGGTGAGCGGGACCAGGTGGGTTTTCGAGGCGGTGGCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCcac                                                                                                                             <  8:182370/145‑1 (MQ=255)                           tGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCcac                                                                                                                             >  7:182370/1‑145 (MQ=255)                             tttGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGa                                                                                                                         <  1:265238/147‑1 (MQ=255)                                 ggggggACGGGGACCAGGTTGCTTTTCGAGGCGGTGTCGCCGGCGCCGGGTAGGGCGCAGGGGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGTATCAAt                                                                                                                    <  3:145593/148‑1 (MQ=39)                                 ggggTTACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAAt                                                                                                                    <  1:323536/148‑1 (MQ=255)                                 ggggTGACCGGGACCAGGTGGCTTTTCGGGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAAtg                                                                                                                   >  6:49871/1‑149 (MQ=255)                                       aCCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCgg                                                                                                                                             <  7:34247/117‑1 (MQ=255)                                       aCCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCgg                                                                                                                                             >  8:34247/1‑117 (MQ=255)                                       aCCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATcc                                                                                                             >  8:270720/1‑149 (MQ=255)                                       aCCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATcc                                                                                                             <  5:200168/149‑1 (MQ=255)                                        ccGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATccc                                                                                                            >  7:205480/1‑149 (MQ=255)                                               cAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGtgtg                                                                                                     >  8:15278/1‑149 (MQ=255)                                                aGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTgg                                                                                                    >  2:164014/1‑149 (MQ=255)                                                 ggTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGcc                                                                                                                                      >  5:228041/1‑114 (MQ=255)                                                 ggTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGcc                                                                                                                                      <  6:228041/114‑1 (MQ=255)                                                  gTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGgcg                                                                                                  >  7:254090/1‑149 (MQ=255)                                                       ttttCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTa                                                                                             >  7:176485/1‑149 (MQ=255)                                                        tttCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTAc                                                                                            >  1:248870/1‑149 (MQ=255)                                                         ttCGGGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTAc                                                                                            <  5:49871/148‑1 (MQ=255)                                                            gAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGt                                                                                        <  7:15278/149‑1 (MQ=255)                                                             aGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTg                                                                                       >  8:262704/1‑149 (MQ=255)                                                              ggCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTgg                                                                                      <  2:248870/149‑1 (MQ=255)                                                              caaggcccgctggcttgagggtgtgaccaccttcgatggcaagccggctgcggacaacctcaagcttaccgccaactgacagggcccTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTg                                                                                       <  8:245446‑M1/62‑1 (MQ=255)                                                                  gcccgctggcttgagggtgtgaccaccttcgatggcaagccggctgcggacaacctcaagcttaccgccaactgacagggcccTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAg                                                                                   >  7:245446‑M1/84‑149 (MQ=255)                                                                   cccgctggcttgagggtgtgaccaccttcgatggcaagccggctgcggacaacctcaagcttaccgccaactgacagggcccTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGc                                                                                  >  3:79859‑M1/83‑149 (MQ=255)                                                                     tCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGccc                                                                                                                                     <  2:152125/95‑1 (MQ=255)                                                                     tCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGccc                                                                                                                                     >  1:152125/1‑95 (MQ=255)                                                                       gccggcgccggTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGc                                                                              <  2:108263/148‑1 (MQ=255)                                                                       gccggcgccggTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCt                                                                             >  4:123766/1‑149 (MQ=255)                                                                       gccggcgccggTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCt                                                                             >  4:85056/1‑149 (MQ=255)                                                                            cgccggTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGccc                                                                        <  7:270720/149‑1 (MQ=255)                                                                              ccggTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTTTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCcgc                                                                      <  3:300779/149‑1 (MQ=255)                                                                                 gTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGa                                                                    >  1:117699/1‑148 (MQ=255)                                                                                    aGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAgg                                                                <  8:254090/149‑1 (MQ=255)                                                                                     gggCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAggg                                                               <  5:121111/149‑1 (MQ=255)                                                                                      ggCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATGCTCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATAAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAggg                                                               >  1:84708/1‑149 (MQ=255)                                                                                      ggCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGc                                                              <  1:164014/149‑1 (MQ=255)                                                                                           aGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCgg                                                                                <  1:157381/126‑1 (MQ=255)                                                                                           aGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCgg                                                                                >  2:157381/1‑126 (MQ=255)                                                                                                     gaCGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCgg                                               >  1:6003/1‑149 (MQ=255)                                                                                                           gtGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCt                                         >  7:338620/1‑149 (MQ=255)                                                                                                              gTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCtt                                        >  4:303441/1‑147 (MQ=255)                                                                                                              gTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGa                                      <  8:176485/149‑1 (MQ=255)                                                                                                              gTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGa                                      <  4:328482/149‑1 (MQ=255)                                                                                                               ttCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAg                                     <  3:123766/149‑1 (MQ=255)                                                                                                                  aTGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTg                                       >  1:22667/1‑144 (MQ=255)                                                                                                                  aTGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTg                                       <  2:22667/144‑1 (MQ=255)                                                                                                                  aTGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGtt                                  >  3:67944/1‑149 (MQ=255)                                                                                                                     gTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTc                               <  7:262704/149‑1 (MQ=255)                                                                                                                      tGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTcc                              >  5:282612/1‑149 (MQ=255)                                                                                                                       gCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTg                                                   >  6:285795/1‑127 (MQ=255)                                                                                                                       gCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTg                                                   <  5:285795/127‑1 (MQ=255)                                                                                                                              cTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCgg                      >  4:280301/1‑149 (MQ=255)                                                                                                                                         cGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAgg                                    <  8:305436/125‑1 (MQ=255)                                                                                                                                         cGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAgg                                    >  7:305436/1‑125 (MQ=255)                                                                                                                                              tttgCTTTTTGGCGGGCTTGCACGATCCCACAGGATCAATGTTATCCCGAGTGTGGCGCTGTACCCGTGGTAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAggt       <  2:117699/146‑1 (MQ=255)                                                                                                                                              ttGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAggt       >  3:277361/1‑149 (MQ=255)                                                                                                                                                ggCTTTTTCGCGGGCATGCCCGCTCCCACCGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAggtgg     >  2:266943/1‑149 (MQ=255)                                                                                                                                                ggCTTTTTCGCGGGCATGCCCGCTCCAACAGGATCATTGTGATCCCGAGTGTGGCGCTGTACCCGTGGTAGCGGGCTTGCCCGCGATAGGGCCCTGTCAGTTGGCGGTAATCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAggtg      <  2:185645/148‑1 (MQ=255)                                                                                                                                                 gCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCgg                                               >  6:127335/1‑106 (MQ=255)                                                                                                                                                 gCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCgg                                               <  5:127335/106‑1 (MQ=255)                                                                                                                                                 gCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCa                           >  1:7333/1‑126 (MQ=255)                                                                                                                                                 gCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCa                           <  2:7333/126‑1 (MQ=255)                                                                                                                                                   tttttCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTca  >  2:60203/1‑149 (MQ=255)                                                                                                                                                   tttttCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTca  >  4:239113/1‑149 (MQ=255)                                                                                                                                                     TTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTg                                                   >  3:106488‑M1/1‑98 (MQ=255)                                                                                                                                                     TTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTg                                                   <  4:106488‑M1/98‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CGGCCTCTACGGCGGATTCGGCGATCTGTTTGGGGGTGACCGGGACCAGGTGGCTTTTCGAGGCGGTGTCGCCGGCGCCGGTGAGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCA  >  NC_002947/364419‑364712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.