New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	364566 =	59 (1.070)	3 (0.060)	3/234	NT	5.4%	intergenic (‑33/+91)	PP_0303/caiX	dehydrocarnitine cleavage enzyme/carnitine uptake ABC transporter substrate‑binding protein
	?	NC_002947	364649 =	51 (1.010)					intergenic (‑116/+8)	PP_0303/caiX	dehydrocarnitine cleavage enzyme/carnitine uptake ABC transporter substrate‑binding protein

AGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGATTCCAGCGCGTCCTTGTGGTC  >  NC_002947/364502‑364791                                                                                                                                                     |                                                                                                                                               aGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAgg                                                                                                                                               <  8:254090/149‑1 (MQ=255)  gggCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAggg                                                                                                                                              <  5:121111/149‑1 (MQ=255)   ggCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATGCTCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATAAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAggg                                                                                                                                              >  1:84708/1‑149 (MQ=255)   ggCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGc                                                                                                                                             <  1:164014/149‑1 (MQ=255)                  gaCGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCgg                                                                                                                              >  1:6003/1‑149 (MQ=255)                        gtGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCt                                                                                                                        >  7:338620/1‑149 (MQ=255)                           gTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCtt                                                                                                                       >  4:303441/1‑147 (MQ=255)                           gTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGa                                                                                                                     <  4:328482/149‑1 (MQ=255)                           gTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGa                                                                                                                     <  8:176485/149‑1 (MQ=255)                            ttCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAg                                                                                                                    <  3:123766/149‑1 (MQ=255)                               aTGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTg                                                                                                                      >  1:22667/1‑144 (MQ=255)                               aTGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTg                                                                                                                      <  2:22667/144‑1 (MQ=255)                               aTGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGtt                                                                                                                 >  3:67944/1‑149 (MQ=255)                                  gTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTc                                                                                                              <  7:262704/149‑1 (MQ=255)                                   tGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTcc                                                                                                             >  5:282612/1‑149 (MQ=255)                                    gCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTg                                                                                                                                  >  6:285795/1‑127 (MQ=255)                                    gCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTg                                                                                                                                  <  5:285795/127‑1 (MQ=255)                                           cTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCgg                                                                                                     >  4:280301/1‑149 (MQ=255)                                                      cGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAgg                                                                                                                   >  7:305436/1‑125 (MQ=255)                                                      cGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAgg                                                                                                                   <  8:305436/125‑1 (MQ=255)                                                           tttgCTTTTTGGCGGGCTTGCACGATCCCACAGGATCAATGTTATCCCGAGTGTGGCGCTGTACCCGTGGTAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAggt                                                                                      <  2:117699/146‑1 (MQ=255)                                                           ttGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAggt                                                                                      >  3:277361/1‑149 (MQ=255)                                                             ggCTTTTTCGCGGGCATGCCCGCTCCCACCGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAggtgg                                                                                    >  2:266943/1‑149 (MQ=255)                                                             ggCTTTTTCGCGGGCATGCCCGCTCCAACAGGATCATTGTGATCCCGAGTGTGGCGCTGTACCCGTGGTAGCGGGCTTGCCCGCGATAGGGCCCTGTCAGTTGGCGGTAATCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAggtg                                                                                     <  2:185645/148‑1 (MQ=255)                                                              gCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCgg                                                                                                                              >  6:127335/1‑106 (MQ=255)                                                              gCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCgg                                                                                                                              <  5:127335/106‑1 (MQ=255)                                                              gCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCa                                                                                                          <  2:7333/126‑1 (MQ=255)                                                              gCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCa                                                                                                          >  1:7333/1‑126 (MQ=255)                                                                tttttCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTca                                                                                 >  4:239113/1‑149 (MQ=255)                                                                tttttCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTca                                                                                 >  2:60203/1‑149 (MQ=255)                                                                  TTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTg                                                                                                                                  >  3:106488‑M1/1‑98 (MQ=255)                                                                  TTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTg                                                                                                                                  <  4:106488‑M1/98‑1 (MQ=255)                                                                      GCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCt                                                                           <  1:355190‑M1/149‑1 (MQ=255)                                                                         GGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCaa                                                                        >  4:21460‑M1/1‑149 (MQ=255)                                                                           CATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGc                                                                      >  3:303441‑M1/1‑149 (MQ=255)                                                                               cccGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGc                                                                  >  6:184531/1‑149 (MQ=255)                                                                                  gctcccacgggtacagcgccacactcgggatcacattgatcctgtgggagcgggcatgcccgcgaaaGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCggg                                                               >  3:79859‑M2/68‑149 (MQ=255)                                                                                   ctcccacgggtacagcgccacactcgggatcacattgatcctgtgggagcgggcatgcccgcgaaaGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGc                                                              >  7:245446‑M2/67‑149 (MQ=255)                                                                                   cTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGc                                                              <  3:239113/149‑1 (MQ=255)                                                                                      ccACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCtt                                                           <  1:60203/149‑1 (MQ=255)                                                                                      ccACAGGATCAATGTGATCCCGAGGGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCtt                                                           <  3:280301/149‑1 (MQ=255)                                                                                       cacgggtacagcgccacactcgggatcacattgatcctgtgggagcgggcatgcccgcgaaaGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTg                                                          <  8:245446‑M2/87‑1 (MQ=255)                                                                                       cacaGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCg                                                                                                            <  5:49018/99‑1 (MQ=255)                                                                                       cacaGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCg                                                                                                            >  6:49018/1‑99 (MQ=255)                                                                                        acaGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGc                                                                                                                         >  5:257322/1‑85 (MQ=255)                                                                                        acaGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGc                                                                                                                         <  6:257322/85‑1 (MQ=255)                                                                                            gATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTc                                                     >  2:106553/1‑149 (MQ=255)                                                                                              tCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCgg                                                   <  6:282612/149‑1 (MQ=255)                                                                                              tCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCgg                                                   >  3:36575/1‑149 (MQ=255)                                                                                                aaTGTGATCCCGAGTGTGGCGCGGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCggg                                                  <  8:205480/148‑1 (MQ=255)                                                                                                  tgtgATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTGAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGggtg                                               <  1:106553/149‑1 (MQ=255)                                                                                                  tgtgATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGggtg                                               <  2:286463/149‑1 (MQ=255)                                                                                                          cGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCtt                                         >  1:96776/1‑147 (MQ=255)                                                                                                          cGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGa                                       <  4:36575/149‑1 (MQ=255)                                                                                                               gtgGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCAc                                  >  6:312090/1‑149 (MQ=255)                                                                                                                   cgcTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGc                              <  2:96776/149‑1 (MQ=255)                                                                                                                        tACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCggg                           <  2:84708/147‑1 (MQ=255)                                                                                                                        tACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCt                         <  1:266943/149‑1 (MQ=255)                                                                                                                          cccGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGa                       >  1:1971/1‑149 (MQ=255)                                                                                                                           ccGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGAt                      <  4:277361/149‑1 (MQ=255)                                                                                                                             gTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGATTc                    <  2:76184/149‑1 (MQ=255)                                                                                                                              tGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGATTc                    >  8:150354/1‑148 (MQ=255)                                                                                                                               gggAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGATTc                    >  8:31438/1‑147 (MQ=255)                                                                                                                                      ggCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGATTCCAGCGCGTc           <  3:85056/149‑1 (MQ=255)                                                                                                                                         ttGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGATTCCAGCGCGTCCtt        <  4:67944/149‑1 (MQ=255)                                                                                                                                            cccgcgaaaGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTCTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGATTCCAGCGCGTCCTtgtg     <  5:312090‑M2/140‑1 (MQ=255)                                                                                                                                               gcgaaaGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGATTCCAGCGCGTCCTTGTGGTc  >  8:158126‑M2/7‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                               AGGGCGCAGGTGATGATGACGTCGTGGTTCATGGTGCAGTTCCTTGTGATG‑TCGGTGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGATCAATGTGATCCCGAGTGTGGCGCTGTACCCGTGGGAGCGGGCTTGCCCGCGAAAGGGCCCTGTCAGTTGGCGGTAAGCTTGAGGTTGTCCGCAGCCGGCTTGCCATCGAAGGTGGTCACACCCTCAAGCCAGCGGGCCTTGTCCTCGGGGTGGTCCTTGAGCCACTGGCGGGCTGATTCCAGCGCGTCCTTGTGGTC  >  NC_002947/364502‑364791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.