New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3079127	49 (0.880)	4 (0.070)	4/252	NT	7.6%	coding (139/1410 nt)	PP_2688	hypothetical protein
	?	NC_002947	= 3079160	49 (0.900)					coding (106/1410 nt)	PP_2688	hypothetical protein

TTCAGCGCCTGTACCCGTTGAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCATTGAAAAAAGCCCGGGACATACCCACTCC  >  NC_002947/3078982‑3079274                                                                                                                                                  |                                                                                                                                                    ttCAGCGCCTGTACCCGTTGAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGaaa                                                                                                                                                  <  6:120903/149‑1 (MQ=255)   cAGCGCCTGTACCCGTTGAATGCAGTCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGaaa                                                                                                                                                  >  6:2996/1‑147 (MQ=255)      cgcCTGTACCCGTTGAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAAc                                                                                                                                                 >  1:163689/1‑145 (MQ=255)      cgcCTGTACCCGTTGAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAAc                                                                                                                                                 <  2:163689/145‑1 (MQ=255)          tGTACCCGTTGAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTc                                                                                                                                         >  4:109596/1‑149 (MQ=255)            tACCCGTTGAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCg                                                                                                                                        <  8:300299/148‑1 (MQ=255)               ccGTTGAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCt                                                                                                                                    >  8:91137/1‑149 (MQ=255)                  ttGAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTcgc                                                                                                                                 >  5:37604/1‑149 (MQ=255)                    gAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTcgc                                                                                                                                 >  4:319929/1‑147 (MQ=255)                    gAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTcgc                                                                                                                                 <  3:319929/147‑1 (MQ=255)                          aGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGgaacagcgccggcgcgaggccgacctgc                                                                                                                         >  7:146436‑M1/1‑121 (MQ=255)                            ccACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTg                                                                                                                       <  7:184536/149‑1 (MQ=255)                                    gACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGgaacagcgccggcgcgaggccgacctgctgtttcacc                                                                                                                <  8:146436‑M1/148‑38 (MQ=255)                                      ccGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAAc                                                                                                             <  1:253432/149‑1 (MQ=255)                                         tGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTc                                                                                                           >  4:233661/1‑148 (MQ=255)                                                   gCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGgtgt                                                                                                >  4:265699/1‑149 (MQ=255)                                                   gCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGgtgt                                                                                                <  2:34778/149‑1 (MQ=255)                                                       gcgcGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGgc                                                                                            <  7:32732/149‑1 (MQ=255)                                                         gcgGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGGGGGGTGTTGgcca                                                                                          <  6:37604/149‑1 (MQ=255)                                                         gcgGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGgcca                                                                                          <  3:233661/149‑1 (MQ=255)                                                               gctgcGCGGGATCATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGgtg                                                                                                 >  5:230324/1‑136 (MQ=255)                                                                   cgcgGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCgg                                                                                  <  7:91137/147‑1 (MQ=255)                                                                          tgatATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTcc                                                                         >  8:200447/1‑149 (MQ=255)                                                                                cGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTTCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGt                                                                                                                      <  3:155196/98‑1 (MQ=255)                                                                                cGAAGGGGATCAGGCGCTCGGTATCCTGCTAGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATaa                                                                   >  1:29371/1‑149 (MQ=255)                                                                                 gAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCTAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGaa                                                                             >  1:207006/1‑138 (MQ=255)                                                                                 gAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCTAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGaa                                                                             <  2:207006/138‑1 (MQ=255)                                                                                 gAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGgtg                                                                                                 >  5:279764/1‑118 (MQ=255)                                                                                 gAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGgtg                                                                                                 <  6:279764/118‑1 (MQ=255)                                                                                 gAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAAt                                                                  >  4:161364/1‑149 (MQ=255)                                                                                 gAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCAGGCGCTGTGCCCGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAAt                                                                  >  7:102492/1‑149 (MQ=255)                                                                                        aTCTGGCGCTCTGTATCCTGATTGTCGCCATACAAGGTGAATGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATgcg                                                               <  4:90666/145‑1 (MQ=255)                                                                                        aTCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGACTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATgcg                                                               >  3:90666/1‑145 (MQ=255)                                                                                            ggCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAg                                                       >  2:220285/1‑149 (MQ=255)                                                                                            ggCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAg                                                       >  6:245072/1‑149 (MQ=255)                                                                                              cgcTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGtt                                                     <  5:2996/149‑1 (MQ=255)                                                                                                cTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTg                                                                                              >  2:126396/1‑106 (MQ=255)                                                                                                cTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTg                                                                                              <  1:126396/106‑1 (MQ=255)                                                                                                     tATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTcc                                              <  1:220285/149‑1 (MQ=255)                                                                                                           gCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCAGTCCGCTTCg                                        >  4:195424/1‑149 (MQ=255)                                                                                                                 cGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACAtt                                  >  5:349871/1‑149 (MQ=255)                                                                                                                  gCCATACAAGGTGAAGGTGATGCCTGCGCGGTGgaacagcgccggcgcgaggccgacctgctgtt                                                                                                                     <  7:321077‑M1/65‑33 (MQ=255)                                                                                                                  gCCATACAAGGTGAAGGTGATGCCTGCGCGGTGgaacagcgccggcgcgaggccgacctgctgtt                                                                                                                     >  8:321077‑M1/1‑33 (MQ=255)                                                                                                                  gCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACAtt                                  >  2:183414/1‑148 (MQ=255)                                                                                                                    cATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCa                               <  6:339778/149‑1 (MQ=255)                                                                                                                    cATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCa                               <  3:265699/149‑1 (MQ=255)                                                                                                                     aTACAAGGTGAAGGTGATGCCTGCGCGGTGAAACTGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGGAACTCCAGCGGGGTGTTGGCCAGCGAGCGGGCGAACTCCTGATTATGCTGGCGGCAGTTGCCGGCCGCTTCGTACATTTCAt                              <  3:161364/149‑1 (MQ=255)                                                                                                                     aTACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCAt                              >  1:169311/1‑149 (MQ=255)                                                                                                                      tACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCAtt                             <  6:349871/149‑1 (MQ=255)                                                                                                                            gtgaaggtgaTGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCg                                        >  1:24578/1‑132 (MQ=255)                                                                                                                            gtgaaggtgaTGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCg                                        <  2:24578/132‑1 (MQ=255)                                                                                                                             tgaaggtgaTGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCATTGaaaaaa                      <  3:109596/149‑1 (MQ=255)                                                                                                                              gaaggtgaTGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAAc                                                                            <  7:169957/94‑1 (MQ=255)                                                                                                                                     aTGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGTTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCATTGAAAAAAGCCCGGGa              >  1:162597/1‑149 (MQ=255)                                                                                                                                     aTGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCATTGAAAAAAGCCCGGGa              <  1:183414/149‑1 (MQ=255)                                                                                                                                       gCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAAt                                                                  <  6:273525/95‑1 (MQ=255)                                                                                                                                       gCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAAt                                                                  >  5:273525/1‑95 (MQ=255)                                                                                                                                               ggTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCcaccgcgcaggcatcaccttcaccttgtatggcgacaagcaggataccgagcgcctgatccccttcgatatcatcccgcgcagcatccgcgccagcgaatggcgcacggtc     <  8:146436‑M2/148‑112 (MQ=255)                                                                                                                                                 tGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCATTGAAAAAAGCCCGGGACATACCCACTcc  >  1:172755/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                    TTCAGCGCCTGTACCCGTTGAATGCAGCCACGCTCGACCGTGCGCCATTCGCTGGCGCGGATGCTGCGCGGGATGATATCGAAGGGGATCAGGCGCTCGGTATCCTGCTTGTCGCCATACAAGGTGAAGGTGATGCCTGCGCGGTGAAACAGCAGGTCGGCCTCGCGCCGGCGCTGTTCCAGCAACTCCAGCGGGGTGTTGGCCAGCCAGCGGGCGAACTCCTGATAATGCGGGCGGCAGTTGCCGTCCGCTTCGTACATTTCATTGAAAAAAGCCCGGGACATACCCACTCC  >  NC_002947/3078982‑3079274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.