New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3522702 =	60 (1.080)	5 (0.100)	5/226	NT	11.6%	intergenic (+489/‑208)	PP_5584/PP_3113	hypothetical protein/transposase
	?	NC_002947	3522789 =	23 (0.470)					intergenic (+576/‑121)	PP_5584/PP_3113	hypothetical protein/transposase

TGGCCGCGGCCGTCCCCGGCAATGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATT  >  NC_002947/3522554‑3522849                                                                                                                                                       |                                                                                                                                                    tGGCCGCGGCCGTCCCCGGCAATGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTGCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTgg                                                                                                                                                     >  2:250457/1‑149 (MQ=255) tGGCCGCGGCCGTCCCCGGCAATGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTgg                                                                                                                                                     >  4:272640/1‑149 (MQ=255)  ggCCGCGGCCGTCCCCGGCAATGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCCCATGTTCAAAGTGCTggc                                                                                                                                                    >  1:215725/1‑149 (MQ=255)           cGTCCCCGGCAATGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTggcccaggccca                                                                                                                                           <  1:65390/149‑1 (MQ=255)            gTCCCCGGCAATGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCAt                                                                                                                                          <  8:140707/149‑1 (MQ=255)               cccGGCAATGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGc                                                                                                                                       >  2:1285/1‑149 (MQ=255)                    cAATGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGtt                                                                                                                                    >  7:168596/1‑147 (MQ=255)                      aTGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGc                                                                                                                                <  1:244179/149‑1 (MQ=255)                          gTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCAtgt                                                                                                                            >  7:71688/1‑149 (MQ=255)                              tCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTgg                                                                                                                                                     <  2:61623/120‑1 (MQ=255)                              tCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTgg                                                                                                                                                     >  1:61623/1‑120 (MQ=255)                              tCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATgg                                                                                                                                        >  4:191321/1‑133 (MQ=255)                              tCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATgg                                                                                                                                        <  3:191321/133‑1 (MQ=255)                                gAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCgg                                                                                                                      >  5:74087/1‑149 (MQ=255)                                gAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCgg                                                                                                                      >  2:258173/1‑149 (MQ=255)                                 aaGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGc                                                                                                                     <  8:168596/149‑1 (MQ=255)                                    gCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGt                                                                                                                   >  3:99365/1‑148 (MQ=255)                                      cAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCAtgtg                                                                                                                           <  1:195518/138‑1 (MQ=255)                                      cAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCAtgtg                                                                                                                           >  2:195518/1‑138 (MQ=255)                                      cAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGtt                                                                                                                  >  8:257374/1‑147 (MQ=255)                                       aGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCGGAGGTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCCGGCCCATGGCGTTCAGCATGTGCTCGGCGtt                                                                                                                  >  1:286397/1‑148 (MQ=255)                                       aGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAg                                                                                                               >  8:80229/1‑149 (MQ=255)                                       aGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAg                                                                                                               >  5:263118/1‑149 (MQ=255)                                       aGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAg                                                                                                               >  1:346882/1‑149 (MQ=255)                                        gcgcTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGc                                                                                                              <  7:257374/149‑1 (MQ=255)                                            ttGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCcgcg                                                                                                          >  3:162821/1‑149 (MQ=255)                                               cccGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCAt                                                                                                                              <  8:171538/126‑1 (MQ=255)                                               cccGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCAt                                                                                                                              >  7:171538/1‑126 (MQ=255)                                               cccGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTg                                                                                                       <  6:263118/149‑1 (MQ=255)                                                  ggCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGt                                                                                                    <  4:162821/149‑1 (MQ=255)                                                    ccTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTg                                                                                                  <  4:99365/149‑1 (MQ=255)                                                    ccTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTg                                                                                                  <  1:315381/149‑1 (MQ=255)                                                     cTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTgg                                                                                                 >  8:190929/1‑149 (MQ=255)                                                        gACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGACGTTCAGCATGTGCTCGGCGTTCAGCCGCGGt                                                                                                        <  2:313614/139‑1 (MQ=255)                                                        gACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGACGTTCAGCATGTGCTCGGCGTTCAGCCGCGGt                                                                                                        >  1:313614/1‑139 (MQ=255)                                                         acacCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTCTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGGcac                                                                                             >  5:279412/1‑149 (MQ=255)                                                          cacCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTcacc                                                                                            <  2:215725/149‑1 (MQ=255)                                                           acCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTcacca                                                                                           >  5:255294/1‑149 (MQ=255)                                                             ccAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTg                                                                                                  <  7:79238/140‑1 (MQ=255)                                                             ccAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTg                                                                                                  >  8:79238/1‑140 (MQ=255)                                                             ccAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACg                                                                                         >  4:303904/1‑149 (MQ=255)                                                              cAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCa                                                                                                                <  2:167416/125‑1 (MQ=255)                                                              cAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCa                                                                                                                >  1:167416/1‑125 (MQ=255)                                                              cAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGACGCGGTGCGTTGGTCACCACg                                                                                         >  8:264012/1‑148 (MQ=255)                                                                gCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGcac                                                                                      <  6:138870/149‑1 (MQ=255)                                                                   tcggggatcaggtaagcgctttgaatgtggggttcatggagcgcttacgagccaatgccaggcctgttgcgcctgctggagcatGCCCAgg                                                                                                                                               <  4:53376‑M1/7‑1 (MQ=255)                                                                   tcggggatcaggtaagcgctttgaatgtggggttcatggagcgcttacgagccaatgccaggcctgttgcgcctgctggagcatGCCCAgg                                                                                                                                               >  3:53376‑M1/85‑91 (MQ=255)                                                                       cAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGa                                                                               >  2:37803/1‑149 (MQ=255)                                                                         ggCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATg                                                                             <  2:286397/149‑1 (MQ=255)                                                                              gTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATg                                                                        <  3:272640/149‑1 (MQ=255)                                                                               taagcgctttgaatgtggggttcatggagcgcttacgatccaatgccaggcctgttgcgcctgctggagcatGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCAt                                                                         >  6:90154‑M1/73‑149 (MQ=255)                                                                                   gTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCt                                                                   >  8:164204/1‑149 (MQ=255)                                                                                      gggCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTgg                                                                 <  3:303904/148‑1 (MQ=255)                                                                                      gggCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTgg                                                                 <  6:255294/148‑1 (MQ=255)                                                                                       ggCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGc                                                               <  7:164204/149‑1 (MQ=255)                                                                                        gCAGCGGGGCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCTCCACGCACATGCCGATGCCATGGGCCTGGGCa                                                              <  1:37803/149‑1 (MQ=255)                                                                                           gCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGc                                                           <  7:80229/149‑1 (MQ=255)                                                                                             gggTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCCAGGCCCATGGCATCGGCATgtgc                                                         <  7:190929/149‑4 (MQ=255)                                                                                              ggTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACAt                                                                                    <  2:71304/121‑1 (MQ=255)                                                                                              ggTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACAt                                                                                    >  1:71304/1‑121 (MQ=255)                                                                                              ggTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCCAGGCCCATGGCATCGGCATgtgcg                                                        <  1:258173/149‑5 (MQ=255)                                                                                                     catggagcgcttacgagccaatgccaggcctgttgcgcctgctggagcatGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGcc                                                                           >  1:52420‑M1/51‑125 (MQ=255)                                                                                                     catggagcgcttacgagccaatgccaggcctgttgcgcctgctggagcatGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGcc                                                                           <  2:52420‑M1/75‑1 (MQ=255)                                                                                                        ggagcgcttacgagccaatgccaggcctgttgcgcctgctggagcatGCCCAGGCCCATGGCAT‑CGGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTcacca                                                                                           <  3:147808‑M1/58‑1 (MQ=255)                                                                                                        ggagcgcttacgagccaatgccaggcctgttgcgcctgctggagcatGCCCAGGCCCATGGCAT‑CGGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTcacca                                                                                           >  4:147808‑M1/48‑105 (MQ=255)                                                                                                                           cGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGc                             >  5:215589/1‑149 (MQ=255)                                                                                                                             gCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTc                           <  1:250457/149‑1 (MQ=255)                                                                                                                                accaGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTCGt                         >  5:362077/1‑148 (MQ=255)                                                                                                                                         tGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTCGTAAGCGCTCCa               >  6:259487/1‑149 (MQ=255)                                                                                                                                           ttCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATgg                                                                       <  3:319391/91‑1 (MQ=255)                                                                                                                                           ttCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATgg                                                                       >  4:319391/1‑91 (MQ=255)                                                                                                                                             cAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTAGGCGTTAAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTCGTAAGCTCTCCATGaa           >  8:8814/1‑149 (MQ=255)                                                                                                                                                       GCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTCGTAAGCGCTCCATGAACCCCACAtt  >  5:71660‑M1/1‑148 (MQ=255)                                                                                                                                                       GCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTCGTAAGCGCTCCATGAACCCCACAtt  <  6:71660‑M1/148‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                    TGGCCGCGGCCGTCCCCGGCAATGAGTCCTCGAAGGCCAGCGCTTGCCCGGCCTCGACACCCAGCCGCTGCAGGCCGGTGAGGTAGGGCAGCGGGTCCG‑‑GTTTGGGCCGTGCCAGCTCTTCGGCCACCAGCACATGTTCAAAGTGCTGGCCCAGGCCCATGGCGTTCAGCATGTGCTCGGCGTTCAGCCGCGGTGCGTTGGTCACCACGCACATGCCGATGCCATGGGCCTGGGCATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTCGTAAGCGCTCCATGAACCCCACATT  >  NC_002947/3522554‑3522849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.