New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3539531	49 (0.880)	4 (0.080)	4/236	NT	7.9%	coding (218/1539 nt)	PP_3127	exopolysaccharide transport protein
	?	NC_002947	= 3539584	48 (0.940)					coding (271/1539 nt)	PP_3127	exopolysaccharide transport protein

GTGAGTGCCGCAGTCATTCTCGCCGCGACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGACAAGATCGACCAGATGCGCAACGCGATCGTGGTCGAAACCCTG  >  NC_002947/3539386‑3539676                                                                                                                                                  |                                                                                                                                                  gTGAGTGCCGCAGTCATTCTCGCCGCGACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAgcg                                                                                                                                                >  3:113420/1‑149 (MQ=255)        ccGCAGTCATTCTCGCCGCGACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAg                                                                                                                                         <  7:4075/149‑1 (MQ=255)             gTCATTCTCGCCGCGACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGAt                                                                                                                                    <  5:326795/149‑1 (MQ=255)                    tcGCCGCGACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCaa                                                                                                                             >  4:207994/1‑149 (MQ=255)                      gccgcGACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGa                                                                                                                                          <  4:344581/134‑1 (MQ=255)                      gccgcGACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGa                                                                                                                                          >  3:344581/1‑134 (MQ=255)                      gccgcGACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAAc                                                                                                                            <  4:296029/148‑1 (MQ=255)                        cgcgACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCatcacc                                                                                                                         >  7:140222/1‑144 (MQ=255)                         gcgACCGTGGCCGTAGAGTTGATGGTGCCGCCGATCTACCAGTCTACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCAGATGAGCGCATCGAGGTGATCCGTCAACGGGt                                                                                                                        <  4:272194/149‑1 (MQ=255)                             ccGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGAGCATCGAGGTGATCCGTCAACGGGtgat                                                                                                                     >  7:326740/1‑148 (MQ=255)                                tGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAtgcgcagcaggttgtcgcgggtcatcacccgtt                                                                                                                  >  3:116226‑M1/1‑115 (MQ=255)                                     gTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGa                                                                                                            >  8:294132/1‑149 (MQ=255)                                     gTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGa                                                                                                            <  5:75521/149‑1 (MQ=255)                                         ctctGATGGTGCCGCCGATCTACCATTCGACCGGCACCATTCTGGTGGCGTCGCAGCACATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAAc                                                                                                        <  8:326740/146‑1 (MQ=255)                                         cgTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAAc                                                                                                        <  7:294132/149‑1 (MQ=255)                                                    ccgccgATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTgcgc                                                                                               <  3:127816/147‑1 (MQ=255)                                                    ccgccgATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTgcgc                                                                                               >  4:127816/1‑147 (MQ=255)                                                      gccgATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATc                                                                                                                                            >  4:306616/1‑100 (MQ=255)                                                      gccgATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATc                                                                                                                                            <  3:306616/100‑1 (MQ=255)                                                       ccgATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCAtcat                                                                                          <  6:232043‑M2/149‑5 (MQ=255)                                                          aTCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCAtcatcgg                                                                                       <  8:277371‑M2/149‑8 (MQ=255)                                                               ccAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAtgcgcagcaggttgtcgcgggtcatcacccgttgacggatcacctcgatgcgctcatcgg                                                                                       <  4:116226‑M1/144‑61 (MQ=255)                                                               ccAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCAtcatcgg                                                                                       >  5:232043‑M2/1‑137 (MQ=255)                                                                  gTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCcgc                                                                                                              >  1:245808/1‑118 (MQ=255)                                                                  gTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCcgc                                                                                                              <  2:245808/118‑1 (MQ=255)                                                                  gTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTAc                                                                                >  6:319464/1‑148 (MQ=255)                                                                   tCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGa                                                                              >  8:127568/1‑149 (MQ=255)                                                                   tCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGa                                                                              >  6:241020/1‑149 (MQ=255)                                                                    cGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGAc                                                                             <  3:207994/149‑1 (MQ=255)                                                                     gACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGAc                                                                             <  5:241020/148‑1 (MQ=255)                                                                        cGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACctct                                                                         >  5:165988/1‑149 (MQ=255)                                                                           cACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGAc                                                                             >  3:103976/1‑142 (MQ=255)                                                                           cACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGAc                                                                             <  4:103976/142‑1 (MQ=255)                                                                           cACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCg                                                                      >  3:47041/1‑149 (MQ=255)                                                                                        gAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCtt                                                         >  3:212876/1‑149 (MQ=255)                                                                                        gAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCtt                                                         <  4:113420/149‑1 (MQ=255)                                                                                          gTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCa                                                       <  4:47041/149‑1 (MQ=255)                                                                                          gTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCa                                                       <  4:212876/149‑1 (MQ=255)                                                                                          gTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCa                                                       <  6:16724/149‑1 (MQ=255)                                                                                           tCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAg                                                      >  6:326945/1‑149 (MQ=255)                                                                                                gcagATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGaaa                                                 <  5:319464/149‑1 (MQ=255)                                                                                                   gATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGc                                               >  1:257894/1‑148 (MQ=255)                                                                                                      ttCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAtgcgcagcaggttgtcgcgggtcatcacccgttgacggatcacctcgatgcgct                                                                                             >  1:229310‑M1/1‑45 (MQ=255)                                                                                                      ttCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAtgcgcagcaggttgtcgcgggtcatcacccgttgacggatcacctcgatgcgct                                                                                             <  2:229310‑M1/99‑55 (MQ=255)                                                                                                      ttCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGAc                                            >  5:353404/1‑148 (MQ=255)                                                                                                        cGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGACaa                                          <  6:165988/148‑1 (MQ=255)                                                                                                         gCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGAc                                            >  1:9304/1‑145 (MQ=255)                                                                                                                   gtgtCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGACAAGATCGACCAGAt                              >  3:292358/1‑149 (MQ=255)                                                                                                                      tCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGACAAGATCGACCAGATgc                            <  7:277371/148‑1 (MQ=255)                                                                                                                        gACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGACAAGATCGACCAGATgcgc                          >  1:179509/1‑148 (MQ=255)                                                                                                                           caacaaCACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCAtcatcggcaa                                                                                    >  6:331818‑M2/1‑77 (MQ=255)                                                                                                                           caacaaCACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCAtcatcggcaa                                                                                    <  5:331818‑M2/87‑11 (MQ=255)                                                                                                                             acaacaCCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGa                                                   <  6:245709/118‑1 (MQ=255)                                                                                                                             acaacaCCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGa                                                   >  5:245709/1‑118 (MQ=255)                                                                                                                                  acCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGACAAGATc                                      <  3:336611/126‑1 (MQ=255)                                                                                                                                  acCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGACAAGATc                                      >  4:336611/1‑126 (MQ=255)                                                                                                                                         ttGCCGATGAtgcgcagcaggttgtcgcgggtcatcacccgttgacggatcacctcgatgcgctcatcggcaaagctggtgttgttg                                                                      >  6:331818‑M1/1‑10 (MQ=255)                                                                                                                                         ttGCCGATGAtgcgcagcaggttgtcgcgggtcatcacccgttgacggatcacctcgatgcgctcatcggcaaagctggtgttgttg                                                                      <  5:331818‑M1/87‑78 (MQ=255)                                                                                                                                         ttGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTc                                                        <  6:295386/101‑1 (MQ=255)                                                                                                                                         ttGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTc                                                        >  5:295386/1‑101 (MQ=255)                                                                                                                                            ccGATGAtgcgcagcaggttgtcgcgggtcatcacccgttgacggatcacctcgatgcgctcatcggcaaagctggtgttgttggtcgacaccagctcaggcgaaatctgctgcgactccaccagaatggtgccggtcgactggtagat     <  8:277371‑M1/149‑143 (MQ=255)                                                                                                                                            ccGATGAtgcgcagcaggttgtcgcgggtcatcacccgttgacggatcacctcgatgcgctcatcggcaaagctggtgttgttggtcgacaccagctcaggcgaaatctgctgcgactccaccagaatggtgccggtcgactgg          >  5:232043‑M1/1‑7 (MQ=255)                                                                                                                                            ccGATGAGCGCATCGAGGTGATCCTTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGACAAGATCGACCAGATGCGCAACGCGATCGTGGTCGAAAc      <  6:353404/148‑1 (MQ=255)                                                                                                                                            ccGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCAtcatcggcaaagctggtgttgttggtcgacaccagctcaggcgaaatctgctgcgactccaccagaatggtgccggtcgactgg          <  4:116226‑M2/144‑85 (MQ=255)                                                                                                                                               atgatgcgcagcaggttgtcgcgggtcatcacccgttgacggatcacctcgatgcgctcatcggcaaagctggtgttgttggtcgacaccagctcaggcgaaatctgctgcgactccaccagaatggtgccggtcgactggtagatcgg  <  6:232043‑M1/149‑146 (MQ=255)                                                                                                                                                  aGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCAtcatcggcaaagctggtgttgttggtcgacaccagctcaggcgaa                                                 <  2:229310‑M2/99‑46 (MQ=255)                                                                                                                                                  aGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCAtcatcggcaaagctggtgttgttggtcgacaccagctcaggcgaa                                                 >  1:229310‑M2/1‑54 (MQ=255)                                                                                                                                                  |                                                                                                                                                  GTGAGTGCCGCAGTCATTCTCGCCGCGACCGTGGCCGTCGCGTTGATGGTGCCGCCGATCTACCAGTCGACCGGCACCATTCTGGTGGAGTCGCAGCAGATTTCGCCTGAGCTGGTGTCGACCAACAACACCAGCTTTGCCGATGAGCGCATCGAGGTGATCCGTCAACGGGTGATGACCCGCGACAACCTGCTGCGCATCATCGGCAAGTACGACCTCTTCGCCGACAAGCGCTTCAGCGAAAGCGACAAGATCGACCAGATGCGCAACGCGATCGTGGTCGAAACCCTG  >  NC_002947/3539386‑3539676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.