New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4282722	57 (1.030)	4 (0.080)	4/238	NT	7.3%	coding (508/1089 nt)	PP_3753	AraC family transcriptional regulator
	?	NC_002947	= 4282759	48 (0.930)					coding (471/1089 nt)	PP_3753	AraC family transcriptional regulator

GTGCACTGCGCAGAAAGGTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCAAGGGGTCGGCAATGTTCGACTGCACGCTGATCACCGCCCGC  >  NC_002947/4282575‑4282870                                                                                                                                                      |                                                                                                                                                     gTGCACTGCGCAGAAAGGTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCCGGCGg                                                                                                                                                     <  6:2705‑M1/149‑2 (MQ=255)   gCACTGCGCAGAAAGGTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGAAGCAAGTCGTCCTCCTGGGCCGGGCGCGa                                                                                                                                                   >  5:47846/1‑149 (MQ=255)    cACTGCGCAGAAAGGTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCGCTTCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGgcgc                                                                                                                                                     <  1:102891/148‑1 (MQ=255)         cgcAGAAAGGTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACcgc                                                                                                                                             >  2:263752/1‑149 (MQ=255)             gAAAGGTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGc                                                                                                                                         <  8:333988/149‑1 (MQ=255)             gAAAGGTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGc                                                                                                                                         >  2:326389/1‑149 (MQ=255)                ccgTCTTCAGGGCTGCCCGATCCTGCACCCCCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGGCCGGCCCCCACAGCAGCAAGGCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTcc                                                                                                                                      <  6:196131/147‑1 (MQ=255)                aGGTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTcc                                                                                                                                      >  7:9042/1‑149 (MQ=255)                  gTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCCCAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGt                                                                                                                                    <  1:263752/149‑1 (MQ=255)                           gCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGAt                                                                                                                           <  6:249750/149‑1 (MQ=255)                               cccGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATgg                                                                                                                         <  4:210091/147‑1 (MQ=255)                                ccGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGTG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATg                                                                                                                          >  7:291329/1‑145 (MQ=255)                                ccGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGTG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATg                                                                                                                          <  8:291329/145‑1 (MQ=255)                                  gATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATc                                                                                                                    >  8:27425/1‑149 (MQ=255)                                   aTCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATcc                                                                                                                   >  2:289770/1‑149 (MQ=255)                                      cTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCc                                                                                                                <  5:143905‑M2/149‑2 (MQ=255)                                        gcagcaCCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCATGTCGTCTTCCTGTGACGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATcc                                                                                                                   <  1:261909/144‑1 (MQ=255)                                        gCACCACCGGCAGGATCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCAAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGACGATGGCAATcc                                                                                                                   >  2:261909/1‑144 (MQ=255)                                         caccacCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCcgc                                                                                                              >  6:143905‑M2/1‑145 (MQ=255)                                          accaccGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCcgccc                                                                                                            >  4:291388‑M2/1‑144 (MQ=255)                                           ccaccGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCcgcccg                                                                                                           <  5:295121‑M2/149‑7 (MQ=255)                                            caccGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCcgcccgg                                                                                                          <  5:354487‑M2/149‑8 (MQ=255)                                             accGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGgcggattgccatcgaccgcacggagctcgcggtgtcgcgcccggc                                                                                                         <  4:21614‑M1/149‑46 (MQ=255)                                               cGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGgcggattgccatcgaccgcacggagctcgcggtgtcgcgcccggccc                                                                                                       <  8:172651‑M1/149‑48 (MQ=255)                                               cGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGgcca                                                                                                       <  8:42146/149‑1 (MQ=255)                                               cGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGgcca                                                                                                       <  1:289770/149‑1 (MQ=255)                                                   aGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGgcggattgccatcgaccgcacggagctcgcggtgtcgcgcccgg                                                                                                          >  2:343094‑M1/1‑98 (MQ=255)                                                   aGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGgcggattgccatcgaccgcacggagctcgcggtgtcgcgcccgg                                                                                                          <  1:343094‑M1/142‑45 (MQ=255)                                                     gtgcAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCcagccagc                                                                                                 <  6:2879/147‑1 (MQ=255)                                                       gcAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGgccagc                                                                                                     <  6:302677/143‑1 (MQ=255)                                                       gcAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGgccagc                                                                                                     >  5:302677/1‑143 (MQ=255)                                                          ggTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCcagcacagc                                                                                            <  7:27425/149‑1 (MQ=255)                                                               gcgcTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCAGAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGc                                                                                        <  1:333132/148‑1 (MQ=255)                                                               gcgcTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCAGCCGCCCGGCCAGCCAGCACAGCATGcc                                                                                       >  8:333340/1‑149 (MQ=255)                                                                       gAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGatcatc                                                                                <  6:295121/148‑1 (MQ=255)                                                                       gAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGatcat                                                                                 >  7:51289/1‑147 (MQ=255)                                                                       gAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGa                                                                                     >  6:81130/1‑143 (MQ=255)                                                                       gAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGa                                                                                     <  5:81130/143‑1 (MQ=255)                                                                       gAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGAtcatca                                                                               >  4:306497/1‑149 (MQ=255)                                                                       gAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGAtcatca                                                                               <  6:47846/149‑1 (MQ=255)                                                                        aaCTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAg                                                                              >  3:27170/1‑149 (MQ=255)                                                                             cACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCgg                                                                                                                                <  4:254001/94‑1 (MQ=255)                                                                             cACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCgg                                                                                                                                >  3:254001/1‑94 (MQ=255)                                                                             cACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCcagcac                                                                                               >  4:2745/1‑127 (MQ=255)                                                                             cACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCcagcac                                                                                               <  3:2745/127‑1 (MQ=255)                                                                             cACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGatca                                                                                  >  7:337797/1‑140 (MQ=255)                                                                             cACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGatca                                                                                  <  8:337797/140‑1 (MQ=255)                                                                              aCCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGatc                                                                                   >  6:287954/1‑138 (MQ=255)                                                                              aCCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGatc                                                                                   <  5:287954/138‑1 (MQ=255)                                                                                           tCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCt                                                             <  6:354487/149‑1 (MQ=255)                                                                                              gCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCgg                                                          >  7:2742/1‑149 (MQ=255)                                                                                              gCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCgg                                                          >  7:24911/1‑149 (MQ=255)                                                                                                     aGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGAc                                                   <  3:306497/149‑1 (MQ=255)                                                                                                         gCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCgg                                               <  8:9042/149‑1 (MQ=255)                                                                                                              tCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCaa                                          <  8:2742/149‑1 (MQ=255)                                                                                                              tCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCaa                                          <  4:27170/149‑1 (MQ=255)                                                                                                                cGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCAAgg                                        <  8:51289/149‑1 (MQ=255)                                                                                                                 ggCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCgg                                               <  3:28307/141‑1 (MQ=255)                                                                                                                 ggCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCgg                                               >  4:28307/1‑141 (MQ=255)                                                                                                                 ggCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCAAggg                                       <  7:321363/149‑1 (MQ=255)                                                                                                                   cccccACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCcagcac                                                                                               >  3:310598/1‑91 (MQ=255)                                                                                                                   cccccACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCcagcac                                                                                               <  4:310598/91‑1 (MQ=255)                                                                                                                         cagcagCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCAAGGGGTCGGCaa                               <  1:326389/149‑1 (MQ=255)                                                                                                                          agcagcAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCAAGGGGTCGGCAAt                              <  8:24911/149‑1 (MQ=255)                                                                                                                            cagcaAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCa                                                                         <  2:46454/104‑1 (MQ=255)                                                                                                                            cagcaAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCa                                                                         >  1:46454/1‑104 (MQ=255)                                                                                                                              gcaAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCAAGGGGTCGGCAATGTTc                          >  7:331237/1‑149 (MQ=255)                                                                                                                                  gtcgtcCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGAAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCAAGGGGTCGGCAATGTTCGCCt                      >  4:9265/1‑149 (MQ=255)                                                                                                                                         tcctGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCAAGGGGTCGGCAATGTTCGACTGCACGCt               >  7:264407/1‑149 (MQ=255)                                                                                                                                             gggCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCcgcccggcccaggaggacgacttgctgctgtgggggccggacctgcggctgggcagcggacgcaccgaggtggagttcgacagcgcctacctgcgcctgccg           <  8:172651‑M2/149‑103 (MQ=255)                                                                                                                                               gCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCcgcccggcccaggaggacgacttgctgctgtgggggccggacctgcggctgggcagcggacgcaccgaggtggagttcgacagcgcctacctgcgcctgccggt         <  4:21614‑M2/149‑105 (MQ=255)                                                                                                                                                ccGGGCGgcggattgccatcgaccgcacggagctcgcggtgtcgcgcccggcccaggaggacgacttgctgctgtgggggccggacctgcggctgggcagcggacgcaccgaggtggagttcgacagcgcctacctgcgcctgccggtg        <  5:354487‑M1/149‑143 (MQ=255)                                                                                                                                                ccGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCcgcccggcccaggaggacgacttgctgctgtgggggccggacctgcggctgggcagcggacgcaccgaggtggagttcgacagcgcctacctgcgcct               >  2:343094‑M2/1‑44 (MQ=255)                                                                                                                                                ccGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCcgcccggcccaggaggacgacttgctgctgtgggggccggacctgcggctgggcagcggacgcaccgaggtggagttcgacagcgcctacctgcgcct               <  1:343094‑M2/142‑99 (MQ=255)                                                                                                                                                 cGGGCGgcggattgccatcgaccgcacggagctcgcggtgtcgcgcccggcccaggaggacgacttgctgctgtgggggccggacctgcggctgggcagcggacgcaccgaggtggagttcgacagcgcctacctgcgcctgccggtgg       <  5:295121‑M1/149‑144 (MQ=255)                                                                                                                                                  gggCGgcggattgccatcgaccgcacggagctcgcggtgtcgcgcccggcccaggaggacgacttgctgctgtgggggccggacctgcggctgggcagcggacgcaccgaggtggagttcgacagcgcctacctgcgcctgccggtggt      >  4:291388‑M1/1‑5 (MQ=255)                                                                                                                                                    gcggcggattgccatcgaccgcacggagctcgcggtgtcgcgcccggcccaggaggacgacttgctgctgtgggggccggacctgcggctgggcagcggacgcaccgaggtggagttcgacagcgcctacctgcgcctgccggtggtg     >  6:143905‑M1/1‑3 (MQ=255)                                                                                                                                                      ggcggattgccatcgaccgcacggagctcgcggtgtcgcgcccggcccaggaggacgacttgctgctgtgggggccggacctgcggctgggcagcggacgcaccgaggtggagttcgacagcgcctacctgcgcctgccggtggtgcag  <  5:143905‑M1/149‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GTGCACTGCGCAGAAAGGTCTTCAGGGCTGCCCGATCCTGCACCACCGGCAGGCGCAGGTAGGCGCTGTCGAACTCCACCTCGGTGCG‑‑TCCGCTGCCCAGCCGCAGGTCCGGCCCCCACAGCAGCAAGTCGTCCTCCTGGGCCGGGCGCGACACCGCGAGCTCCGTGCGGTCGATGGCAATCCGCCGCCCGGCCAGCCAGCACAGCATGCCGATCATCAGCACCAGGTAGGTTTCCTCGGCATAGACCCGGGTCAAGGGGTCGGCAATGTTCGACTGCACGCTGATCACCGCCCGC  >  NC_002947/4282575‑4282870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.