New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4990033	44 (0.790)	4 (0.080)	4/242	NT	8.1%	coding (1099/1242 nt)	PP_4399	glutamine synthetase
	?	NC_002947	= 4990061	49 (0.940)					coding (1071/1242 nt)	PP_4399	glutamine synthetase

GCGCTCAGGCCTGTGCCGCCAGGACCCGACGCTCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAGGCTGGCTGCAATGGCCAGGTAGGGGTTGG  >  NC_002947/4989886‑4990179                                                                                                                                                     |                                                                                                                                                    gcgcTCAGGCCTGTGCCGCCAGGACCCGACGCTCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCtt                                                                                                                                                    <  2:213222/149‑1 (MQ=255)      cAGGCCTGTGCCGCCAGGACCCGACGCTCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTgccgtg                                                                                                                                               >  6:306140‑M1/1‑143 (MQ=255)      cAGGCCTGTGCCGCCAGGACCCGACGCTCACACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAg                                                                                                                                               <  2:355056/149‑1 (MQ=255)       aGGCCTGTGCCGCCAGGACCCGACGCTCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAg                                                                                                                                               <  1:59247/148‑1 (MQ=255)       aGGCCTGTGCCGCCAGGACCCGACGCTCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAg                                                                                                                                               <  3:297444/148‑1 (MQ=255)                            gACGCTCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACgg                                                                                                                          >  6:200594/1‑148 (MQ=255)                            gACGCTCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACgg                                                                                                                          >  6:112409/1‑148 (MQ=255)                              cGCTCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCag                                                                                                                       >  8:240261‑M2/1‑147 (MQ=255)                                 tCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTgccgtgcacgctgcacgcggcccttgaaaggct                                                                                                                    >  7:179206‑M1/1‑116 (MQ=255)                                     aCGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTgccgtgcacgctgcacgcggcccttgaaaggctcaag                                                                                                                <  5:306140‑M1/149‑38 (MQ=255)                                       ggTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTgccgtgcacgctgcacgcggcccttgaaaggctcaagcg                                                                                                              <  8:179206‑M1/149‑40 (MQ=255)                                           tgATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCg                                                                                                          >  3:61803/1‑149 (MQ=255)                                                tcgtcgAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCAc                                                                                                     >  8:237892/1‑149 (MQ=255)                                                tcgtcgAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCAc                                                                                                     >  4:332020/1‑149 (MQ=255)                                                   tcgAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTc                                                                                                  <  3:332020/149‑1 (MQ=255)                                                     gaagaaATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCgcgtgcagcgtg                                                                                                                               <  8:200709/118‑1 (MQ=255)                                                     gaagaaATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCgcgtgcagcgtg                                                                                                                               >  7:200709/1‑118 (MQ=255)                                                           aTCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGc                                                                                          >  6:302315/1‑149 (MQ=255)                                                              gctcagctcaAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCaggctc                                                                                                                   <  3:46002‑M2/121‑7 (MQ=255)                                                              gctcagctcaAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCaggctc                                                                                                                   >  4:46002‑M2/1‑115 (MQ=255)                                                              gctcagctcaAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGcc‑c                                                                                       <  4:191108/148‑1 (MQ=255)                                                              gctcagctcaAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑Ct                                                                                      <  2:326805/149‑1 (MQ=255)                                                                tcagctcaAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCAGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCggg                                                                                                        >  4:272647/1‑130 (MQ=255)                                                                tcagctcaAGGGGCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCggg                                                                                                        <  3:272647/130‑1 (MQ=255)                                                                  agctcaAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGa                                                                                   <  5:200594/148‑1 (MQ=255)                                                                    ctcaAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTc                                                                                                  <  4:341500/132‑1 (MQ=255)                                                                    ctcaAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTc                                                                                                  >  3:341500/1‑132 (MQ=255)                                                                                gCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCt                                                                    >  8:162462/1‑149 (MQ=255)                                                                                  tGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTg                                                                   >  6:31074/1‑148 (MQ=255)                                                                                        tGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAAt                                                                                              <  4:351827/116‑1 (MQ=255)                                                                                        tGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAAt                                                                                              >  3:351827/1‑116 (MQ=255)                                                                                        tGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTgg                                                                                    <  5:263755/125‑1 (MQ=255)                                                                                        tGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTgg                                                                                    >  6:263755/1‑125 (MQ=255)                                                                                               ttCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGa                                                     >  5:533/1‑149 (MQ=255)                                                                                                  gATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATg                                                   <  6:285532/148‑1 (MQ=255)                                                                                                  gATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGc                                                  >  7:144624/1‑149 (MQ=255)                                                                                                   aTGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGcc                                                 <  3:59475/149‑1 (MQ=255)                                                                                                    tGAACTCGCTGCCGAACAGTTCCCTCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCa                                                <  4:61803/149‑1 (MQ=255)                                                                                                      aaCTCGCTGCCGAACAGTTCCCGCGCCAGCGTGGCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCAt                                               >  1:42869/1‑149 (MQ=255)                                                                                                       aCTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATg                                              >  5:190909/1‑148 (MQ=255)                                                                                                           gCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCAATTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGc                                          <  8:144624/148‑1 (MQ=255)                                                                                                                cGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCcggcg                                    <  7:237892/149‑1 (MQ=255)                                                                                                                     aGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGTTGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAg                               <  1:70360/149‑1 (MQ=255)                                                                                                                       ttCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAggc                             >  2:280146/1‑149 (MQ=255)                                                                                                                          ccGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGAt                                                                                  >  1:211609/1‑93 (MQ=255)                                                                                                                          ccGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGAt                                                                                  <  2:211609/93‑1 (MQ=255)                                                                                                                          ccGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAggctgg                          <  7:162462/149‑1 (MQ=255)                                                                                                                           cgcgCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAggctggc                         <  5:77046/149‑1 (MQ=255)                                                                                                                           cgcgCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAggctggc                         <  2:42869/149‑1 (MQ=255)                                                                                                                                  gCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAGGCTGGCTGCAATg                  >  5:329031/1‑149 (MQ=255)                                                                                                                                        ctgcGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAGGCTGGCTGCAATGGCCAg             <  5:112409/149‑1 (MQ=255)                                                                                                                                           cgcTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCaggctcaagcgcagcacgctggcgcgggaactgttcggcagcgagttcatcgaaggctacattgccagcaagacccttgagctgagcgatttcttcgacgagatcacacc           <  8:179206‑M2/149‑111 (MQ=255)                                                                                                                                             cTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCaggctcaagcgcagcacgctggcgcgggaactgttcggcagcgagttcatcgaaggctacattgccagcaagacccttgagctgagcgatttcttcgacgagatcacaccgt         <  5:306140‑M2/149‑113 (MQ=255)                                                                                                                                             cTTGAGCCTTTCAAGGGACGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAGGCTGGCTGCAATGGCCAGGTAgg        >  4:77692/1‑149 (MQ=255)                                                                                                                                                gAGCCTgccgtgcacgctgcacgcggcccttgaaaggctcaagcgcagcacgctggcgcgggaactgttcggcagcgagttcatcgaaggctacattgccagcaagacccttgagctgagc                                  >  4:46002‑M1/1‑6 (MQ=255)                                                                                                                                                gAGCCTgccgtgcacgctgcacgcggcccttgaaaggctcaagcgcagcacgctggcgcgggaactgttcggcagcgagttcatcgaaggctacattgccagcaagacccttgagctgagc                                  <  3:46002‑M1/121‑116 (MQ=255)                                                                                                                                                 aGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCaggctcaagcgcagcacgctggcgcgggaactgttcggcagcgagttcatcgaaggctacattgccagcaagacccttgagctgagcgatttcttcgacgagatcacaccgtggga     >  7:179206‑M2/1‑33 (MQ=255)                                                                                                                                                  gCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAGGCTGGCTGCAATGGCCAGGTAGGGGTTg   <  6:533/149‑1 (MQ=255)                                                                                                                                                   ccTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAGGCTGGCTGCAATGGCCAGGTAGGGGTTgg  >  4:303419/1‑149 (MQ=255)                                                                                                                                                    cTgccgtgcacgctgcacgcggcccttgaaaggctcaagcgcagcacgctggcgcgggaactgttcggcagcgagttcatcgaaggctacattgccagcaagacccttgagctgagcgatttcttcgacgagatcacaccgtgggagcg  >  8:240261‑M1/1‑2 (MQ=255)                                                                                                                                                     tttCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCCGGTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAGGCTGGCTGCAATGGCCAGGTAGGGGTTgg  >  1:103252/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCGCTCAGGCCTGTGCCGCCAGGACCCGACGCTCCCACGGTGTGATCTCGTCGAAGAAATCGCTCAGCTCAAGGGTCTTGCTGGCAATGTAGCCTTCGATGAACTCGCTGCCGAACAGTTCCCGCGCCAGCGT‑GCTGCGCTTGAGCCTTTCAAGGGCCGCGTGCAGCGTGCACGGCAGGCTCAGGTGCTCGGGCACTTCGAATTCGCC‑CTGGATGGCCGGCGATGGCTGCAAGCGCTGCTCGATGCCATGCAGCCCGGCGGCCAGGCTGGCTGCAATGGCCAGGTAGGGGTTGG  >  NC_002947/4989886‑4990179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.