New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5244707	46 (0.830)	3 (0.060)	3/248	NT	5.7%	coding (114/834 nt)	hmgR	Hmg transcriptional repressor
	?	NC_002947	= 5244765	55 (1.030)					coding (172/834 nt)	hmgR	Hmg transcriptional repressor

GATAAATCCGGAACCTCCCCTCCCATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGG  >  NC_002947/5244570‑5244855                                                                                                                                          |                                                                                                                                                     gATAAATCCGGAACCTCCCCTCCCATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGa                                                                                                                                           <  4:192532/149‑1 (MQ=255)     aaTCCGGAACCTCCCCTCCCATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCAc                                                                                                                                       >  6:196931/1‑149 (MQ=255)       tCCGGAACCTCCCCTCCCATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGt                                                                                                                                     >  3:65068/1‑149 (MQ=255)       tCCGGAACCTCCCCTCCCATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGt                                                                                                                                     >  3:317533/1‑149 (MQ=255)       tCCGGAACCTCCCCTCCCATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGt                                                                                                                                     >  2:323470/1‑149 (MQ=255)         cGGAACCTCCCCTCCCATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTg                                                                                                                                    >  8:102711/1‑148 (MQ=255)                    ctcccATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCg                                                                                                                        >  8:288202/1‑149 (MQ=255)                       ccATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTg                                                                                                                          <  5:227937/144‑1 (MQ=255)                       ccATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTg                                                                                                                          >  6:227937/1‑144 (MQ=255)                       ccATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGa                                                                                                                       <  1:323470/147‑1 (MQ=255)                           ggCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGa                                                                                                                       <  1:287769/143‑1 (MQ=255)                           ggCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGa                                                                                                                       >  2:287769/1‑143 (MQ=255)                                          ccccACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCAgcgcctgcaggtagcgatgcactttgctcgcaggcatctgcacgtgctcggc                                                                                                  >  4:322171‑M1/1‑97 (MQ=255)                                             cACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAgg                                                                                               >  1:73545/1‑149 (MQ=255)                                                cGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGgcgc                                                                                            >  8:221169/1‑149 (MQ=255)                                                 gACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCt                                                                                           >  6:48421‑M2/1‑148 (MQ=255)                                                 gACACCGGCAAGCAGAAGGTCCGCTCGGCAGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCt                                                                                           >  5:74545‑M2/1‑148 (MQ=255)                                                   cacCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCtga                                                                                         >  2:73545‑M2/1‑146 (MQ=255)                                                       ggCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCACAGTGCATCGCTACCTGCAGGCGCTGATTGc                                                                                     <  1:214875/149‑1 (MQ=255)                                                       ggCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGc                                                                                     <  1:59134/149‑1 (MQ=255)                                                       ggCAAGCAGAAGGTCCCCTCCGAGGAAGACGTCACCGACATCCTCAAGGACCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGc                                                                                     >  4:268185/1‑149 (MQ=255)                                                        gCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCATCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGc                                                                                     >  4:212354/1‑148 (MQ=255)                                                        gCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCaaa                                                                                                                  <  7:78447/119‑1 (MQ=255)                                                        gCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCaaa                                                                                                                  >  8:78447/1‑119 (MQ=255)                                                         cAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCAgcgcctgcaggtagcgatgcactttgctcgcaggcatctgcacgtgctcggccaggcgtgatagtga                                                                                   <  3:322171‑M1/149‑68 (MQ=255)                                                         cAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCa                                                                                   <  4:65068/149‑1 (MQ=255)                                                          aaGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGATCTCTCACCCTCGACGTCACTATCAgcgcctgcaggtagcgatgcactttgctcgcaggcatctgcacgtgctcggccaggcgtgatagtgac                                                                                  <  8:290811‑M1/149‑69 (MQ=255)                                                                           ggcggAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACa                                                                   <  7:102711/147‑1 (MQ=255)                                                                           ggcggAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAgg                                                                 <  4:167146/149‑1 (MQ=255)                                                                                    cGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGcc                                                         <  7:288202/148‑1 (MQ=255)                                                                                          cGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCaccaac                                                   >  6:17337/1‑148 (MQ=255)                                                                                            aCATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGATTTGCCGAACAGGATGCGGCCACCAACCAt                                                >  4:111368/1‑149 (MQ=255)                                                                                                       gCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTggg                                     <  3:212354/149‑1 (MQ=255)                                                                                                         ccTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGgc                                   >  3:119749/1‑149 (MQ=255)                                                                                                          cTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGgcg                                  >  5:198519/1‑149 (MQ=255)                                                                                                             gCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGTAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGa                               <  4:317533/149‑1 (MQ=255)                                                                                                             gCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTCCGAGCAAAGTGCATCCCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGCGCTGGGgcgc                                 >  5:123485/1‑147 (MQ=255)                                                                                                               aGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTAc                                                                                                      <  8:238412/76‑1 (MQ=255)                                                                                                               aGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTAc                                                                                                      >  7:238412/1‑76 (MQ=255)                                                                                                                     ctcACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGc                       >  4:6317/1‑149 (MQ=255)                                                                                                                        aCCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGc                       <  5:17337/146‑1 (MQ=255)                                                                                                                          ccTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAg                                                                                                >  4:28939/1‑71 (MQ=255)                                                                                                                          ccTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAg                                                                                                <  3:28939/71‑1 (MQ=255)                                                                                                                          ccTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTg                  >  6:66186/1‑149 (MQ=255)                                                                                                                           cTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGc                       <  3:101371/143‑1 (MQ=255)                                                                                                                           cTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGc                       >  4:101371/1‑143 (MQ=255)                                                                                                                           cTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTgg                 <  6:198519/149‑1 (MQ=255)                                                                                                                              gACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTgggg               <  3:268185/148‑1 (MQ=255)                                                                                                                                 gTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCtgatagtgacgtcgagggtgagagatctgcgagggccttgaggatgtcggtgccgacttccgccgagcggaccttctgctt           <  8:290811‑M2/149‑82 (MQ=255)                                                                                                                                 gTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCgg                                                           >  3:241681/1‑101 (MQ=255)                                                                                                                                 gTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCgg                                                           <  4:241681/101‑1 (MQ=255)                                                                                                                                  tCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCtgatagtgacgtcgagggtgagagttctgcgagggccttgaggatgtcggtgccgacttccgccgagcggaccttctgcttg          <  3:322171‑M2/149‑83 (MQ=255)                                                                                                                                  tCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGATTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTggc          >  6:206418/1‑149 (MQ=255)                                                                                                                                    aCTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTggcgg        <  5:196931/149‑1 (MQ=255)                                                                                                                                       aTCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGgcgc     >  6:323359/1‑149 (MQ=255)                                                                                                                                        tCAgcgcctgcaggtagcgatgcactttgctcgcaggcatctgcacgtgctcggccaggcgtgatagtgacgtcgagggtgagagttctgcgagggccttgaggatgtcggtgccgacttccgccgagcggaccttctgcttgccggtg    >  2:73545‑M1/1‑3 (MQ=255)                                                                                                                                        tCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCt    >  4:152134/1‑149 (MQ=255)                                                                                                                                        tCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCt    >  7:186989/1‑149 (MQ=255)                                                                                                                                          agcgcctgcaggtagcgatgcactttgctcgcaggcatctgcacgtgctcggccaggcgtgatagtgacgtcgagggtgagagttctgcgagggccttgaggatgtcggtgccgacttctgccgagcggaccttctgcttgccggtgtc  >  5:74545‑M1/1‑1 (MQ=255)                                                                                                                                          agcgcctgcaggtagcgatgcactttgctcgcaggcatctgcacgtgctcggccaggcgtgatagtgacgtcgagggtgagagttctgcgagggccttgaggatgtcggtgccgacttccgccgagcggaccttctgcttgccggtgtc  >  6:48421‑M1/1‑1 (MQ=255)                                                                                                                                          aCGCCTGTACGAGCACGTCGAGTTGCCTGCGAGAAAAGTTCATCGGTACGTGCAGGCTGTGATTTCCTTGTGTGTTGCCGAACAGGATGCGGCAACCTAGCATTAAGGGGTGTTGCGCGATGAATTGCGGTTGGGGATGGCGGCGCttg  <  2:136687/149‑3 (MQ=255)                                                                                                                                          aCGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTTGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTg   <  7:221169/148‑1 (MQ=255)                                                                                                                                          aCGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTAc                                             <  4:344374/106‑1 (MQ=255)                                                                                                                                          aCGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTAc                                             >  3:344374/1‑106 (MQ=255)                                                                                                                                          |                                                                                                                                                     GATAAATCCGGAACCTCCCCTCCCATGGCCAAAGCCAGCTCCCCCACCGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGG  >  NC_002947/5244570‑5244855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.