New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5244707	46 (0.830)	3 (0.060)	3/248	NT	5.7%	coding (114/834 nt)	hmgR	Hmg transcriptional repressor
	?	NC_002947	= 5244765	55 (1.030)					coding (172/834 nt)	hmgR	Hmg transcriptional repressor

CGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCGAGAT  >  NC_002947/5244617‑5244908                                                                                                                                                     |                                                                                                                                                cGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGgcgc                                                                                                                                                 >  8:221169/1‑149 (MQ=255)  gACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCt                                                                                                                                                >  6:48421‑M2/1‑148 (MQ=255)  gACACCGGCAAGCAGAAGGTCCGCTCGGCAGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCt                                                                                                                                                >  5:74545‑M2/1‑148 (MQ=255)    cacCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCtga                                                                                                                                              >  2:73545‑M2/1‑146 (MQ=255)        ggCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCACAGTGCATCGCTACCTGCAGGCGCTGATTGc                                                                                                                                          <  1:214875/149‑1 (MQ=255)        ggCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGc                                                                                                                                          <  1:59134/149‑1 (MQ=255)        ggCAAGCAGAAGGTCCCCTCCGAGGAAGACGTCACCGACATCCTCAAGGACCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGc                                                                                                                                          >  4:268185/1‑149 (MQ=255)         gCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCATCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGc                                                                                                                                          >  4:212354/1‑148 (MQ=255)          cAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCa                                                                                                                                        <  4:65068/149‑1 (MQ=255)                            ggcggAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACa                                                                                                                        <  7:102711/147‑1 (MQ=255)                            ggcggAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAgg                                                                                                                      <  4:167146/149‑1 (MQ=255)                                     cGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGcc                                                                                                              <  7:288202/148‑1 (MQ=255)                                           cGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCaccaac                                                                                                        >  6:17337/1‑148 (MQ=255)                                             aCATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGATTTGCCGAACAGGATGCGGCCACCAACCAt                                                                                                     >  4:111368/1‑149 (MQ=255)                                                        gCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTggg                                                                                          <  3:212354/149‑1 (MQ=255)                                                          ccTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGgc                                                                                        >  3:119749/1‑149 (MQ=255)                                                           cTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGgcg                                                                                       >  5:198519/1‑149 (MQ=255)                                                              gCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGTAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGa                                                                                    <  4:317533/149‑1 (MQ=255)                                                              gCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTCCGAGCAAAGTGCATCCCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGCGCTGGGgcgc                                                                                      >  5:123485/1‑147 (MQ=255)                                                                      ctcACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGc                                                                            >  4:6317/1‑149 (MQ=255)                                                                         aCCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGc                                                                            <  5:17337/146‑1 (MQ=255)                                                                           ccTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTg                                                                       >  6:66186/1‑149 (MQ=255)                                                                            cTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGc                                                                            >  4:101371/1‑143 (MQ=255)                                                                            cTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGc                                                                            <  3:101371/143‑1 (MQ=255)                                                                            cTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTgg                                                                      <  6:198519/149‑1 (MQ=255)                                                                               gACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTgggg                                                                    <  3:268185/148‑1 (MQ=255)                                                                                  gTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCtgatagtgacgtcgagggtgagagatctgcgagggccttgaggatgtcggtgccgacttccgccgagcggaccttctgctt                                                                <  8:290811‑M2/149‑82 (MQ=255)                                                                                  gTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCgg                                                                                                                <  4:241681/101‑1 (MQ=255)                                                                                  gTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCgg                                                                                                                >  3:241681/1‑101 (MQ=255)                                                                                   tCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCtgatagtgacgtcgagggtgagagttctgcgagggccttgaggatgtcggtgccgacttccgccgagcggaccttctgcttg                                                               <  3:322171‑M2/149‑83 (MQ=255)                                                                                   tCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGATTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTggc                                                               >  6:206418/1‑149 (MQ=255)                                                                                     aCTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTggcgg                                                             <  5:196931/149‑1 (MQ=255)                                                                                        aTCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGgcgc                                                          >  6:323359/1‑149 (MQ=255)                                                                                         tCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCt                                                         >  4:152134/1‑149 (MQ=255)                                                                                         tCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCt                                                         >  7:186989/1‑149 (MQ=255)                                                                                           aCGCCTGTACGAGCACGTCGAGTTGCCTGCGAGAAAAGTTCATCGGTACGTGCAGGCTGTGATTTCCTTGTGTGTTGCCGAACAGGATGCGGCAACCTAGCATTAAGGGGTGTTGCGCGATGAATTGCGGTTGGGGATGGCGGCGCttg                                                       <  2:136687/149‑3 (MQ=255)                                                                                           aCGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTTGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTg                                                        <  7:221169/148‑1 (MQ=255)                                                                                           aCGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTAc                                                                                                  >  3:344374/1‑106 (MQ=255)                                                                                           aCGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTAc                                                                                                  <  4:344374/106‑1 (MQ=255)                                                                                            cGCCTGGCCGAGCACGTGGAGATGCCTGCGAGCAAAGTGCATCTCTACCTGCAGGCGGTGATTGCGAGTGGTTTTGGCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTggg                                                      <  6:123485/149‑1 (MQ=255)                                                                                            cGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTg                                                                             <  1:8127/126‑1 (MQ=255)                                                                                            cGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTg                                                                             >  2:8127/1‑126 (MQ=255)                                                                                               cTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGc                                                                                                                              <  5:219233/74‑1 (MQ=255)                                                                                               cTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGc                                                                                                                              >  6:219233/1‑74 (MQ=255)                                                                                                  gCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCtgatagtgacgtcgagggtgagagttctgcgagggccttgaggatgtcggtgccgacttccgccgagcggaccttctgcttgccggtgtcggtgggg                                                >  4:322171‑M2/1‑52 (MQ=255)                                                                                                      aGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGATTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGAt                                            <  5:206418/149‑1 (MQ=255)                                                                                                         aCGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGAtgtg                                         <  3:6317/149‑1 (MQ=255)                                                                                                         aCGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGAtgtg                                         >  7:173600/1‑149 (MQ=255)                                                                                                           gTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCt                                       >  3:114679/1‑149 (MQ=255)                                                                                                              cAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGaa                                    <  8:173600/149‑1 (MQ=255)                                                                                                                     cTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTggcg                             >  1:225907/1‑149 (MQ=255)                                                                                                                      tGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTggcgg                            >  5:211596/1‑149 (MQ=255)                                                                                                                       gCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTggcggc                           >  1:247663/1‑149 (MQ=255)                                                                                                                          aGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGAt                        <  3:152134/149‑1 (MQ=255)                                                                                                                                gTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTAAGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTCGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGtt                  >  7:247071/1‑149 (MQ=255)                                                                                                                                   cATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGt                <  3:111368/148‑1 (MQ=255)                                                                                                                                   cATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTc               <  4:119749/149‑1 (MQ=255)                                                                                                                                      cGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAg                                                                                                                       >  6:315622/1‑42 (MQ=255)                                                                                                                                      cGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAg                                                                                                                       <  5:315622/42‑1 (MQ=255)                                                                                                                                        cTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGt          >  6:83972/1‑149 (MQ=255)                                                                                                                                         tACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGtt         >  7:262599/1‑149 (MQ=255)                                                                                                                                           ccTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGc       >  5:327182/1‑149 (MQ=255)                                                                                                                                               cAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCga     <  4:114679/147‑1 (MQ=255)                                                                                                                                               cAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCga     <  8:186989/147‑1 (MQ=255)                                                                                                                                               cAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCga     <  5:323359/147‑1 (MQ=255)                                                                                                                                                aGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCGAGAt  >  7:197743/1‑149 (MQ=255)                                                                                                                                                aGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCGAGAt  <  6:211596/149‑1 (MQ=255)                                                                                                                                                  gcgcTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCgag    >  7:20159/1‑145 (MQ=255)                                                                                                                                                  gcgcTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCgag    <  8:20159/145‑1 (MQ=255)                                                                                                                                                  gcgcTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCGAGAt  >  3:50162/1‑147 (MQ=255)                                                                                                                                                     |                                                                                                                                                CGACACCGGCAAGCAGAAGGTCCGCTCGGCGGAAGTCGGCACCGACATCCTCAAGGCCCTCGCAGAACTCTCACCCTCGACGTCACTATCACGCCTGGCCGAGCACGTGCAGATGCCTGCGAGCAAAGTGCATCGCTACCTGCAGGCGCTGATTGCCAGTGGTTTTGCCGAACAGGATGCGGCCACCAACCATTACGGGCTGGGGCGCGAGGCATTGCGGGTGGGGCTGGCGGCGCTGGGCAGCATCGATGTGCTGAAGGTGGCGGCGATGCCGTTGTCGCAGTTGCGAGAT  >  NC_002947/5244617‑5244908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.