| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5968431 | 30 (0.540) | 4 (0.090) | 3/212 | NT | 15.2% | coding (141/360 nt) | PP_5723 | hypothetical protein |
| ? | NC_002947 | = 5968491 | 20 (0.440) | coding (81/360 nt) | PP_5723 | hypothetical protein | |||||
ATGTGATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGT > NC_002947/5968284‑5968579 | aTGTGATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTgggg > 7:217307/1‑149 (MQ=255) tgtgATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGGTTGGGGt > 5:66962/1‑149 (MQ=255) tgtgATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTgggg < 8:217307/148‑1 (MQ=255) aTTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGTGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCg > 7:330071/1‑148 (MQ=255) gCTCGGGATTGGCCAGTCGCCAGCACGGGAATCATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAgc < 7:259833/148‑1 (MQ=255) cGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGccc > 7:118023/1‑149 (MQ=255) gggATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGcc < 1:194402/147‑1 (MQ=255) ggATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTTCGTAGCGATTTGGGTGCGAATCGccccc > 4:296866/1‑149 (MQ=255) gCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGAt < 3:79728/149‑1 (MQ=255) aGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTtg > 1:352828/1‑149 (MQ=255) ccAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCt > 2:94917/1‑149 (MQ=255) ccAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCt > 3:248467/1‑149 (MQ=255) aGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCtt > 5:171063/1‑148 (MQ=255) gCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGa < 8:84094/149‑1 (MQ=255) cACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGAt < 8:51461/149‑1 (MQ=255) aCGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATg < 6:178375/149‑1 (MQ=255) aaCATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGata < 3:141854/149‑1 (MQ=255) aCATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGatat > 3:141630/1‑149 (MQ=255) cATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATAtt < 4:141630/149‑1 (MQ=255) cacaATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGcc < 4:248467/148‑1 (MQ=255) aaTTTCGGTGCGCAGCAGCGGGGCAAGCTGCGTGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCgggg < 8:330071/149‑1 (MQ=255) aTTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGc > 3:156193/1‑149 (MQ=255) tttCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAGAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGAttt < 3:243781/121‑1 (MQ=255) tttCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAGAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGAttt > 4:243781/1‑121 (MQ=255) tttCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggc > 2:12478‑M1/1‑98 (MQ=255) cGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGc < 8:118023/148‑1 (MQ=255) ggTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCt < 2:352828/148‑1 (MQ=255) gTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCtgt > 5:203251/1‑149 (MQ=255) cgcAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGc < 6:171063/148‑1 (MQ=255) cagcagCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGc > 4:156193‑M2/1‑148 (MQ=255) accagcGGGGCACTCAGCCCCAACAAAGCGCAACAGCTCGCACACTCCACGCGATCTTTGTGGGCCCGG‑‑CCTTGCGTCGCGATTGGGGCGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcc < 8:253738/147‑1 (MQ=25) cGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatc < 1:12478‑M1/149‑68 (MQ=255) cGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGccc < 3:31692‑M2/145‑4 (MQ=255) cGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGccc > 4:31692‑M2/1‑142 (MQ=255) gggCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgc > 6:203251‑M2/1‑140 (MQ=255) ggCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGaa < 5:48219/86‑1 (MQ=255) ggCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGaa > 6:48219/1‑86 (MQ=255) cAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGAGCCTTGCGTAGCGATTGGGGTGCGAACCGCCCCCCAAGATTTGTGGCGTTATGCTGATATTGACCGGGCCCCTGTGGAGgccaatcccg < 1:103400‑M2/149‑11 (MQ=255) cAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGTTTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgac > 1:94917‑M2/1‑137 (MQ=255) cTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaa > 5:230177‑M2/1‑133 (MQ=255) cgAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGc < 1:305797‑M2/129‑2 (MQ=255) cgAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGc > 2:305797‑M2/1‑128 (MQ=255) gAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGcc > 3:233979/1‑95 (MQ=255) gAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGcc < 4:233979/95‑1 (MQ=255) gAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaagg > 1:333682‑M2/1‑127 (MQ=255) gAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatc < 1:104377‑M1/115‑68 (MQ=255) gAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatc > 2:104377‑M1/1‑48 (MQ=255) ggAGCGG‑‑CGTTGCGTGGCTATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATTTTGCCGGGGCCGCTGTGCTGTCCAATCGCTAGGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTgtgcgt < 1:308480/148‑1 (MQ=255) ccTTGCGTCGCGATTGGGctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttc > 1:333682‑M1/1‑18 (MQ=255) ccTTGCGTCGCGATTGGGctgcacagcggccccggcaatatcagcatcaaggcacaaa > 2:207807‑M1/1‑18 (MQ=255) ttGCGTCGCGATTGGGctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcag > 5:230177‑M1/1‑16 (MQ=255) gTCGCGATTGGGctgcacagcggccccggcaatatcagcatcaaggcacaaaacttggggggcgcttcgcaccccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcagcttg > 1:94917‑M1/1‑12 (MQ=255) cgggattGGCctccacaggggcccggtcaatatcagcataacgccacaaatcttggggggcggttcgcaccccaatcgctacgcaaggctccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcagcttg < 1:103400‑M1/146‑140 (MQ=255) gcgATTGGGctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcagcttgccc > 6:203251‑M1/1‑9 (MQ=255) gATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcagcttgccccg < 1:12478‑M2/149‑83 (MQ=255) gATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttc < 1:104377‑M2/115‑49 (MQ=255) gATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttc > 2:104377‑M2/1‑67 (MQ=255) gggctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcagcttgccccg > 4:31692‑M1/1‑3 (MQ=255) gggctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcagcttgccccg < 3:31692‑M1/145‑143 (MQ=255) gggTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCg > 8:153221/1‑149 (MQ=255) ggTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCAt > 6:86665/1‑141 (MQ=255) ggTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCAt < 5:86665/141‑1 (MQ=255) gctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcagcttgccccgctgctg > 4:156193‑M1/1‑1 (MQ=255) gctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcg < 1:305797‑M1/129‑129 (MQ=255) gctgcacagcggccccggcaatatcagcatcaaggcacaaatcttggggggcgcttcgcaccccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcg > 2:305797‑M1/1‑1 (MQ=255) | ATGTGATTTGCTCGGGATTGGCCAGTCGCCAGCACGGGAAACATGCACAATTTCGGTGCGCAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGT > NC_002947/5968284‑5968579 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |