New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5968431	30 (0.540)	4 (0.090)	3/212	NT	15.2%	coding (141/360 nt)	PP_5723	hypothetical protein
	?	NC_002947	= 5968491	20 (0.440)					coding (81/360 nt)	PP_5723	hypothetical protein

CAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGC  >  NC_002947/5968344‑5968639                                                                                                                                                      |                                                                                                                                                     cagcagCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGc                                                                                                                                                     >  4:156193‑M2/1‑148 (MQ=255)  accagcGGGGCACTCAGCCCCAACAAAGCGCAACAGCTCGCACACTCCACGCGATCTTTGTGGGCCCGG‑‑CCTTGCGTCGCGATTGGGGCGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcc                                                                                                                                                    <  8:253738/147‑1 (MQ=25)       cGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGccc                                                                                                                                                   <  3:31692‑M2/145‑4 (MQ=255)       cGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGccc                                                                                                                                                   >  4:31692‑M2/1‑142 (MQ=255)         gggCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgc                                                                                                                                             >  6:203251‑M2/1‑140 (MQ=255)            cAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGGAGCCTTGCGTAGCGATTGGGGTGCGAACCGCCCCCCAAGATTTGTGGCGTTATGCTGATATTGACCGGGCCCCTGTGGAGgccaatcccg                                                                                                                                            <  1:103400‑M2/149‑11 (MQ=255)            cAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGTTTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgac                                                                                                                                          >  1:94917‑M2/1‑137 (MQ=255)                cTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaa                                                                                                                                      >  5:230177‑M2/1‑133 (MQ=255)                     cgAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGc                                                                                                                                                     <  1:305797‑M2/129‑2 (MQ=255)                     cgAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGc                                                                                                                                                     >  2:305797‑M2/1‑128 (MQ=255)                      gAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaagg                                                                                                                                    >  1:333682‑M2/1‑127 (MQ=255)                                                                ggAGCGG‑‑CGTTGCGTGGCTATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATTTTGCCGGGGCCGCTGTGCTGTCCAATCGCTAGGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTgtgcgt                                                                                       <  1:308480/148‑1 (MQ=255)                                                                                    gATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcagcttgccccg                                                                    <  1:12478‑M2/149‑83 (MQ=255)                                                                                    gATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttc                                                                                                      >  2:104377‑M2/1‑67 (MQ=255)                                                                                    gATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttc                                                                                                      <  1:104377‑M2/115‑49 (MQ=255)                                                                                         gggTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCg                                                               >  8:153221/1‑149 (MQ=255)                                                                                          ggTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCAt                                                                      >  6:86665/1‑141 (MQ=255)                                                                                          ggTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCAt                                                                      <  5:86665/141‑1 (MQ=255)                                                                                              cGAAGCCCCCCCCAATATTTGTGCCTTGATGCTGATTTTGCCGGGCCCGCTGTCCAGCCCAAGCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCa                                                          <  3:296866/149‑1 (MQ=255)                                                                                                    gcCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaaggccgctcccacaaagatcgcgtgcagttttcaagctgttgcacatttttcgcgcagcttgccccgctgctgcgcaccgaaa                                                    >  2:12478‑M2/1‑51 (MQ=255)                                                                                                         ccAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACa                                                   <  4:152169/145‑1 (MQ=255)                                                                                                         ccAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACa                                                   >  3:152169/1‑145 (MQ=255)                                                                                                           aaGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCa                                             >  7:81218/1‑149 (MQ=255)                                                                                                               tttGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGcccaatcgcgacgcaagg                                                                                                                                    >  2:207807‑M2/1‑40 (MQ=255)                                                                                                               tttGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCt                                         >  3:195059/1‑149 (MQ=255)                                                                                                                    gCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTg                                                                              <  5:195259/107‑1 (MQ=255)                                                                                                                    gCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTg                                                                              >  6:195259/1‑107 (MQ=255)                                                                                                                     ccTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCgcgc                                    <  7:153221/148‑1 (MQ=255)                                                                                                                      cTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTcgc                                      >  7:281423/1‑145 (MQ=255)                                                                                                                      cTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTcgc                                      <  8:281423/145‑1 (MQ=255)                                                                                                                         gATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGc                                                 <  7:153984/131‑1 (MQ=255)                                                                                                                         gATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGc                                                 >  8:153984/1‑131 (MQ=255)                                                                                                                          aTGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCaaa                               <  8:81218/148‑1 (MQ=255)                                                                                                                                atatTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTtc                        >  2:184362/1‑149 (MQ=255)                                                                                                                                             cGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATg                                           >  7:41103/1‑117 (MQ=255)                                                                                                                                             cGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATg                                           <  8:41103/117‑1 (MQ=255)                                                                                                                                                   gCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGAc       >  6:339501/1‑147 (MQ=255)                                                                                                                                                     aGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAgg   >  7:269305/1‑149 (MQ=255)                                                                                                                                                      gCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGc  >  7:160820/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CAGCAGCGGGGCAAGCTGCGCGAAAAATGTGCAACAGCTTGAAAACTGCACGCGATCTTTGTGGGAGCGG‑‑CCTTGCGTCGCGATTGGGGTGCGAAGCGCCCCCCAAGATTTGTGCCTTGATGCTGATATTGCCGGGGCCGCTGTGCAGCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGC  >  NC_002947/5968344‑5968639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.