New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 284096 =41 (0.740)7 (0.130) 6/242 NT 14.6% coding (1547/2004 nt) betT‑II choline/carnitine/betaine transporter
?NC_002947 284148 = 43 (0.820)coding (1599/2004 nt) betT‑II choline/carnitine/betaine transporter

GCTGCCGTTCTCGCTCATTCTGCTGTGCATGATGTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTGATTACCCAGGACGACCCTAGCCATG  >  NC_002947/284004‑284290
                                                                                                                                                |                                                                                                                                              
gCTGCCGTTCTCGCTCATTCTGCTGTGCATGATGTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGAGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCt                                                                                                                                              >  5:331491/1‑147 (MQ=255)
      gTTCTCGCTCATTCTGCTGTGCATGATGTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCCCGGCGTGGTCGTGGCGGCAGGCCCCACCGCCTGAGCCAgg                                                                                                                                      >  7:262872/1‑149 (MQ=255)
       ttCTCGCTCATTCTGCTGTGCATGATGTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAgg                                                                                                                                      >  4:111425/1‑148 (MQ=255)
         ctcGCTCATTCTGCTGTGCATGATGTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCa                                                                                                                                    <  6:331491/148‑1 (MQ=255)
          tcGCTCATTCTGCTGTGCATGATGTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAg                                                                                                                                           <  1:1994/140‑1 (MQ=255)
          tcGCTCATTCTGCTGTGCATGATGTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAg                                                                                                                                           >  2:1994/1‑140 (MQ=255)
                      ctgTGCATGATGTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTccc                                                                                                                         <  2:99900/146‑1 (MQ=255)
                            atgatgTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGtga                                                                                                                <  5:271240/149‑1 (MQ=255)
                            atgatgTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGtga                                                                                                                >  1:217761/1‑149 (MQ=255)
                                            acaAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTAc                                                                                                      <  6:46790/143‑1 (MQ=255)
                                            acaAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTAc                                                                                                      >  5:46790/1‑143 (MQ=255)
                                                ggCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATgg                                                                                            <  6:182408/149‑1 (MQ=255)
                                                         ccTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATgtgg                                                                                   >  3:50570/1‑149 (MQ=255)
                                                          cTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGgatgat                                                                                       <  2:197472/144‑1 (MQ=255)
                                                          cTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATgtggt                                                                                  >  5:317424/1‑149 (MQ=255)
                                                          cTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGACACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGgatgat                                                                                       >  1:197472/1‑144 (MQ=255)
                                                                  gCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCgg                                                                          >  1:352680/1‑149 (MQ=255)
                                                                   cAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGTTGAGGTGTACCGCGGGATGGATGATGTGGTGCGCCCGGc                                                                         >  4:28203/1‑149 (MQ=255)
                                                                   cAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGc                                                                         >  8:182265/1‑149 (MQ=255)
                                                                         cAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGc                                                                   <  2:352680/149‑1 (MQ=255)
                                                                          aGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGcc                                                                  <  2:217761/149‑1 (MQ=255)
                                                                          aGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGcc                                                                  <  3:111425/149‑1 (MQ=255)
                                                                               gcgcAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGAtgtg                                                                                    <  6:13120/126‑1 (MQ=255)
                                                                               gcgcAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGAtgtg                                                                                    >  5:13120/1‑126 (MQ=255)
                                                                                 gcAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGc                                                           <  6:317424/149‑1 (MQ=255)
                                                                                       gCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAg                                                     >  5:277089/1‑149 (MQ=255)
                                                                                           tCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGtt                                                 >  3:188518/1‑149 (MQ=255)
                                                                                            cgctggcgccagccgccacgaccacgacgtgactgggcgaacggggccagcgCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTc                                                >  5:229759‑M2/53‑149 (MQ=255)
                                                                                             gctggcgccagccgccacgaccacgacgtgactgggcgaacggggccagcgCCTGAGCCAGGCAGTGCACTTCCCGTTGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAgt                                                    >  7:248763‑M2/52‑144 (MQ=255)
                                                                                             gctggcgccagccgccacgaccacgacgtgactgggcgaacggggccagcgCCTGAGCCAGGCAGTGCACTTCCCGTTGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAgt                                                    <  8:248763‑M2/93‑1 (MQ=255)
                                                                                             gctggcgccagccgccacgaccacgacgtgactgggcgaacggggccagcgCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGAt                                                               <  7:18442‑M2/82‑1 (MQ=255)
                                                                                             gctggcgccagccgccacgaccacgacgtgactgggcgaacggggccagcgCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGAt                                                               >  8:18442‑M2/52‑133 (MQ=255)
                                                                                             GCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCg                                               <  2:324317‑M1/149‑1 (MQ=255)
                                                                                             GCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCg                                               <  3:257019‑M1/149‑1 (MQ=255)
                                                                                              ctggcgccagccgccacgaccacgacgtgactgggcgaacggggccagcgCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCg                                               <  7:88517‑M2/98‑1 (MQ=255)
                                                                                              ctggcgccagccgccacgaccacgacgtgactgggcgaacggggccagcgCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCg                                               >  8:88517‑M2/51‑148 (MQ=255)
                                                                                                   cccGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGc                                                           >  8:118680/1‑131 (MQ=255)
                                                                                                   cccGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGc                                                           <  7:118680/131‑1 (MQ=255)
                                                                                                   cccGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAg                                          >  3:265581/1‑148 (MQ=255)
                                                                                                         cGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCATGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCTAGTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGc                                    <  5:120790/148‑1 (MQ=255)
                                                                                                          gCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGcc                                   <  1:324317/148‑1 (MQ=255)
                                                                                                           cccAGTCCCGGCGTGGTCGTGGCGGCAGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTg                                 <  4:257019/149‑1 (MQ=255)
                                                                                                           cccAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTg                                 <  6:70910/149‑1 (MQ=255)
                                                                                                            ccAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTgg                                >  5:169990/1‑149 (MQ=255)
                                                                                                                tCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACt                            >  3:269472/1‑149 (MQ=255)
                                                                                                                  aCGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTg                           <  6:277089/148‑1 (MQ=255)
                                                                                                                    gtcgtggtcgtgGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTGAt                         >  7:310072/1‑148 (MQ=255)
                                                                                                                    gtcgtggtcgtgGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTGAt                         >  5:4374/1‑148 (MQ=255)
                                                                                                                      cgtggtcgtggCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGtt                                                 >  7:177793/1‑122 (MQ=255)
                                                                                                                      cgtggtcgtggCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGtt                                                 <  8:177793/122‑1 (MQ=255)
                                                                                                                             gtggCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACGGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCTGTAAGGCCTGGTACTGATTTCCCAGgac               >  7:157792/1‑149 (MQ=255)
                                                                                                                               ggcggcTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGaa                                                      >  4:7325/1‑108 (MQ=255)
                                                                                                                               ggcggcTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGaa                                                      <  3:7325/108‑1 (MQ=255)
                                                                                                                                     tGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCACGGCGATTGCCTATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTGATTACCCAGGACGACCCTAg       >  7:31173/1‑149 (MQ=255)
                                                                                                                                       gcgcCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTGATTACCCAGGACGACCCTAGc      >  2:46718/1‑148 (MQ=255)
                                                                                                                                        cgcCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTGATTACCCAGGACGACCCTAGCCa    <  5:314751/149‑1 (MQ=255)
                                                                                                                                         gccagcgCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTGATTACCCAGGACGACCCTAGCCAt   >  1:234304‑M2/8‑149 (MQ=255)
                                                                                                                                          ccagcgCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTGATTACCCAGGACGACCCTAGCCATg  <  2:234304‑M2/143‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                              
GCTGCCGTTCTCGCTCATTCTGCTGTGCATGATGTGGGGGCTGCACAAGGCGTTCTACCTGGAGTCGCAGCGGCAGATCGCGCAGATGCACTCGCTGGCCCCGTTCGCCCAGTCACGTCGTGGTCGTGGCGGCTGGCGCCAGCGCCTGAGCCAGGCAGTGCACTTCCCGTCGCGTGATGAGGTGTACCGCTTCATGGATGATGTGGTGCGCCCGGCGATTGCCGATGTGCGTGAAGTGTTCGAGCAGAAAGGCCTGGTACTGATTACCCAGGACGACCCTAGCCATG  >  NC_002947/284004‑284290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.