New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5817718	69 (1.250)	4 (0.080)	4/236	NT	5.6%	coding (236/1011 nt)	pilT	twitching motility protein
	?	NC_002947	= 5817756	71 (1.390)					coding (198/1011 nt)	pilT	twitching motility protein

TCCAGCTCACTCACCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCC  >  NC_002947/5817613‑5817903                                                                                                                                                 |                                                                                                                                                    tCCAGCTCACTCACCGGCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTCGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccg                                                                                                                                                >  5:344086‑M2/1‑144 (MQ=255)     gCTCACTCACCGTCGCAATGCGCCCCGGGATCAGTCCGAAAGGTACCCGCCGGGCCATTCAACTGGCGAAACAGGTTAAGCCGAAAGCGCCCAACCGCCGGCAACTCCACCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccgccg                                                                                                                                             <  1:47983‑M2/149‑9 (MQ=255)     gCTCACTCACCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccggcgc                                                                                                                                            >  4:308655‑M2/1‑140 (MQ=255)      ctcactcaCCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccggcgct                                                                                                                                           <  7:273666‑M2/149‑11 (MQ=255)         actcacCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGCCGCTGAt                                                                                                                                        >  1:326247/1‑149 (MQ=255)           tcacCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCg                                                                                                                                      >  2:35300/1‑149 (MQ=255)           tcacCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCg                                                                                                                                      >  1:71530/1‑149 (MQ=255)            cacCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccggcgc                                                                                                                                            <  3:191441‑M2/142‑10 (MQ=255)            cacCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccggcgc                                                                                                                                            >  4:191441‑M2/1‑133 (MQ=255)             acCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGAAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGtt                                                                                                                                    <  1:326026/149‑1 (MQ=255)                 tCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATc                                                                                                                                 >  4:197243/1‑148 (MQ=255)                 tCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATc                                                                                                                                 >  2:345875/1‑148 (MQ=255)                   gCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCa                                                                                                                               <  4:143922/148‑1 (MQ=255)                     aaTGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCa                                                                                                                            >  5:70683/1‑149 (MQ=255)                     aaTGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGCCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCa                                                                                                                            >  1:358510/1‑149 (MQ=255)                        gcgcCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGc                                                                                                                         >  3:168036/1‑149 (MQ=255)                          gcCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTg                                                                                                                       <  4:168036/149‑1 (MQ=255)                          gcCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTCCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTg                                                                                                                       >  4:24835/1‑149 (MQ=255)                            cccGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGc                                                                                                                     >  7:248835/1‑149 (MQ=255)                              cGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCa                                                                                                                   >  7:211434/1‑149 (MQ=255)                               gggATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCAt                                                                                                                  <  7:255372/149‑1 (MQ=255)                                      g‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTc                                                                                                            >  7:60055/1‑148 (MQ=255)                                      g‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTc                                                                                                            >  6:210334/1‑148 (MQ=255)                                         cGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTg                                                                                                                       <  5:117986/135‑1 (MQ=255)                                         cGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTg                                                                                                                       >  6:117986/1‑135 (MQ=255)                                         cGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGa                                                                                                          >  2:327291/1‑148 (MQ=255)                                            aaGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCaa                                                                                                      <  6:70683/149‑1 (MQ=255)                                             aGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAg                                                                                                     <  7:262831/149‑1 (MQ=255)                                             aGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAg                                                                                                     <  1:327291/149‑1 (MQ=255)                                             aGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAg                                                                                                     <  3:197243/149‑1 (MQ=255)                                               gTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAgg                                                                                                    >  3:42533/1‑148 (MQ=255)                                               gTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGc                                                                                                   >  5:341797/1‑149 (MQ=255)                                                  aCCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCAGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCAcc                                                                                                <  8:60055/149‑1 (MQ=255)                                                   ccgccgGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCAccc                                                                                               >  1:9215/1‑149 (MQ=255)                                                   ccgccgGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCAccc                                                                                               <  1:345875/149‑1 (MQ=255)                                                     gccgGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTg                                                                                             <  2:71530/149‑1 (MQ=255)                                                          gCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCaa                                                                                                      <  6:86737/135‑1 (MQ=255)                                                          gCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCaa                                                                                                      >  5:86737/1‑135 (MQ=255)                                                           ccATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTgg                                                                                                                      <  1:165629/118‑1 (MQ=255)                                                           ccATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTgg                                                                                                                      >  2:165629/1‑118 (MQ=255)                                                                cAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAAcggc                                                                                   <  2:164296/148‑1 (MQ=255)                                                                 aaCTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAAcggcgg                                                                                 <  6:341797/149‑1 (MQ=255)                                                                 aaCTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAAcggcgg                                                                                 <  4:42533/149‑1 (MQ=255)                                                                 aaCTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAAcggcgg                                                                                 <  2:9215/149‑1 (MQ=255)                                                                 aaCTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAAcggcg                                                                                  <  1:35300/148‑1 (MQ=255)                                                                    tGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCaa                                                                              >  3:41030/1‑149 (MQ=255)                                                                         aaaCAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGc                                                                                           <  7:73129/131‑1 (MQ=255)                                                                         aaaCAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGc                                                                                           >  8:73129/1‑131 (MQ=255)                                                                             aGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCTCCCTGGCTCAACTGCGGCAAGCCCATAct                                                                     <  2:358510/149‑2 (MQ=255)                                                                              ggTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGc                                                                    <  2:47983/149‑1 (MQ=255)                                                                                ctCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCGGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTg                                                                  <  8:36930/148‑1 (MQ=255)                                                                                  cAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGc                                                                 >  5:339215/1‑148 (MQ=255)                                                                                  cAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGc                                                                 <  6:339215/148‑1 (MQ=255)                                                                                        aaaGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGTAACTCGc                                                          >  3:348488/1‑149 (MQ=255)                                                                                        aaaGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGc                                                          >  5:274793/1‑149 (MQ=255)                                                                                             gcCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATcc                                                     <  8:273666/149‑1 (MQ=255)                                                                                              cccAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATc                                                      >  7:333140/1‑147 (MQ=255)                                                                                               ccAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAg                                                   <  8:248835/149‑1 (MQ=255)                                                                                                cAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTAt                                                                                                                                  >  8:136539/1‑69 (MQ=255)                                                                                                cAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTAt                                                                                                                                  <  7:136539/69‑1 (MQ=255)                                                                                                cAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAgg                                                  >  3:240583/1‑149 (MQ=255)                                                                                                 aaGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATATGCTGCAACTCGCCATcc                                                     <  4:176510/145‑1 (MQ=255)                                                                                                 aaGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATATGCTGCAACTCGCCATcc                                                     >  3:176510/1‑145 (MQ=255)                                                                                                 aaGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGgc                                                 <  5:210334/149‑1 (MQ=255)                                                                                                   gcgcCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccggcgcttgggcgctttcggctgaacctgtttcgccagttgaatggcccggcggttacctttcggctgatcccggggcgca                                                                 <  8:11811‑M2/131‑85 (MQ=255)                                                                                                   gcgcCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccggcgcttgggcgctttcggctgaacctgtttcgccagttgaatggcccggcggttacctttcggctgatcccggggcgca                                                                 >  7:11811‑M2/1‑47 (MQ=255)                                                                                                    cgcCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGATGCAACTCGCCATCCAGGCgca                                              <  2:326247/149‑1 (MQ=255)                                                                                                      ccGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccggcgcttgggcgctttcggctgaacctgtttcgccagttgaatggcccggcggttacctttcggctgatcccggggc                                                                    <  3:134781‑M2/125‑82 (MQ=255)                                                                                                      ccGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACtgccggcgcttgggcgctttcggctgaacctgtttcgccagttgaatggcccggcggttacctttcggctgatcccggggc                                                                    >  4:134781‑M2/1‑44 (MQ=255)                                                                                                         gCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCgcagc                                            <  8:60808/146‑1 (MQ=255)                                                                                                         gCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCgcagc                                            >  7:60808/1‑146 (MQ=255)                                                                                                          cAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCg                                        <  3:24835/149‑1 (MQ=255)                                                                                                            aCTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGa                                      <  8:211434/149‑1 (MQ=255)                                                                                                                     cAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGccc                             >  7:109385/1‑149 (MQ=255)                                                                                                                        ggTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAg                                                   >  3:147780/1‑124 (MQ=255)                                                                                                                        ggTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAg                                                   <  4:147780/124‑1 (MQ=255)                                                                                                                            cATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCa                      <  6:274793/149‑1 (MQ=255)                                                                                                                              tttCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCgca                                              <  7:292709/123‑1 (MQ=255)                                                                                                                              tttCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCgca                                              >  8:292709/1‑123 (MQ=255)                                                                                                                                   tCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAg               <  8:333140/149‑1 (MQ=255)                                                                                                                                      ccTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTc            >  7:281269/1‑149 (MQ=255)                                                                                                                                          gggCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGaa        >  4:190862/1‑149 (MQ=255)                                                                                                                                           ggCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGTAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGaa        <  4:348488/148‑1 (MQ=255)                                                                                                                                           ggCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGaa        <  4:240583/148‑1 (MQ=255)                                                                                                                                               cACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGcccc   >  2:64697/1‑149 (MQ=255)                                                                                                                                                aCTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGccccc  <  8:281269/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    TCCAGCTCACTCACCGTCGCAATGCGCCCCGGGATCAG‑CCGAAAGGTAACCGCCGGGCCATTCAACTGGCGAAACAGGTTCAGCCGAAAGCGCCCAAGCGCCGGCAACTCCAGCGCAAGGTCCATTTCATCGCCTTGGGCCCACTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCC  >  NC_002947/5817613‑5817903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.