New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 413617	31 (0.590)	4 (0.080)	3/240	NT	11.7%	coding (2571/2934 nt)	glnE	glutamate‑ammonia‑ligase adenylyltransferase
	?	NC_002947	= 413632	31 (0.620)					coding (2586/2934 nt)	glnE	glutamate‑ammonia‑ligase adenylyltransferase

GCTGGTACGGGCCCGTGTGCTGGTGGGTTGCAAGCAGGTGGGGGCGGCATTCGAAGGTGTGCGCGCCAAGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/413464‑413617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtaccGGCAGCCGTCGCCTTGGTACCGAGGTTGTCACGCATCTTGGCGCGCATTTCACTCACCTCGCCGCGCAGCTTTTCCAGGTCGCGGGCCTGGCCCAGTACCTTGGCGCGCACACCTTCGAATGCCGCCCCCACCTGCTTGCAAC  <  NC_002947/413632‑413490                                                                                                                                                                                                                                                                                                           GCTGGTACGGGCCCGTGTGCTGGTGGGTTGCAAGCAGGTGGGGGCGGCATTCGAAGGTGTGCGCGCCAAGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCG                                                                                                                                                      <  1:224826/149‑1     GTACGGGCCCGTGTGCTGGTGGGTTGCAAGCAGGTGGGGGCGGCATTCGAAGGTGTGCGCGCCAAGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTA                                                                                                                                                   <  7:279633/148‑1                             TGCAAGCAGGGGGGGGCGGGATTCGACGGTGTGCGCGCCAAGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCGGCAGCCGTCGCCTTGGTACCGA                                                                                                                          <  4:195827/149‑1                                                                 GCCAAGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCGGCAGCCGTCGCCTTGGTACCGAG                                                                                                                         <  3:196125/114‑1                                                                 GCCAAGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCGGCAGCCGTCGCCTTGGTACCGAG                                                                                                                         >  4:196125/1‑114                                                                    AAGGTACTGGTCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTTAAATGCGCGCCAAGATGCGTGACAACCTCGGTACCGGCAGCCGTCGCCTTGGTACCGA                                                                                                                          <  2:177429/110‑1                                                                                                                                                     GGTACCGGCAGCCGTCGCCTTGGTACCGAGGTTGTCACGCATCTTGGCGCGCATTTCACTCACCTCGCCGCGCAGCTTTTCCAGGTCGCGGGCCTGGCCCAGTACCTTGGCGCGCACACCTTCGAATGCCGCCCCCACCTGCTTGCAAC  <  5:235008/149‑1                                                                                                                                                                                                                                                                                                           GCTGGTACGGGCCCGTGTGCTGGTGGGTTGCAAGCAGGTGGGGGCGGCATTCGAAGGTGTGCGCGCCAAGGTACTGGGCCAGGCCCGCGACCTGGAAAAGCTGCGCGGCGAGGTGAGTGAAATGCGCGCCAAGATGCGTGACAACCTCGGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/413464‑413617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtaccGGCAGCCGTCGCCTTGGTACCGAGGTTGTCACGCATCTTGGCGCGCATTTCACTCACCTCGCCGCGCAGCTTTTCCAGGTCGCGGGCCTGGCCCAGTACCTTGGCGCGCACACCTTCGAATGCCGCCCCCACCTGCTTGCAAC  <  NC_002947/413632‑413490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.