| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 606408 | 40 (0.760) | 3 (0.060) | 3/240 | NT | 7.8% | coding (236/744 nt) | PP_0521 | hypothetical protein |
| ? | NC_002947 | = 606463 | 33 (0.660) | coding (291/744 nt) | PP_0521 | hypothetical protein | |||||
CATCTGGTTAGCGAGGAGTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/606257‑606408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcggGTACAGGTTGTCGTCGTTCTCTTCCTTGTACGAGCCAACCCAGGCATCAGCCTCGCCGCGCTTGACCAGGCCAACCGCCCGGCTGTAGGGCGCGCTCTGGGTAACCACCTTGACTCCGGCCGGCTCGAACACTTTGCGCAGCACATC < NC_002947/606463‑606317 CATCTGGTTAGCGAGGAGTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGC < 1:182615/148‑1CATCTGGTTAGCGAGGAGTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGC > 2:182615/1‑148 ATCTGGTTAGCGAGGAGTGGCTCGACTACCCCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGC > 5:219611/1‑149 CAACGCCGACGGTACCGGTGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAA < 6:144529/114‑1 CGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGGTACAGGTTGTCGTCGTTCTCTTCCTTGTACGAGCCAACCCAGGCATCAGCCTCGCCGCGCTTGA < 3:30945/148‑1 CAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGGTACAGGTTGTCGTCGTTCTCTTCCTTGTACGAGCCAACCCAGGCATCAGCCTCGCCGCGC < 1:190688/142‑1 CAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGGTACAGGTTGTCGTCGTTCTCTTCCTTGTACGAGCCAACCCAGGCATCAGCCTCGCCGCGC > 2:190688/1‑142 gatctCGCGGGTACAGGTTGTCGTCGTTCTCTTCCTTGTACGAGCCAACCCAGGCATCAGCCTCGCCGCGCTTGACCAGGCCAACCGCCCGGCTGTAGGTCGCGCTCTGGGTAACCACCTTGACTCCGGCCGGCTCGAACACTTTGCGC < 5:268368/144‑1 GCGGGTACAGGTTGTCGTCGTTCTCTTCCTTGTACGAGCCAACCCAGGCATCAGCCTCGCCGCGCTTGACCAGGCCAACCGCCCGGCTGTAGGGCGCGCTCTGGGTAACCACCTTGACTCCGGCCGGCTCGAACACTTTGCGC > 6:268368/1‑143 GGGTACAGGTTGTCGTCGTTCTCTTCCTTGTACGAGCCAACCCAGGCATCAGCCTCGCCGCGCTTGACCAGGCCAACCGCCCGGCTGTAGGGCGCGCTCTGGGTAACCACCTTGACTCCGGCCGGCTCGAACACTTTGCGCAGCACATC < 6:214177/149‑1 CATCTGGTTAGCGAGGAGTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/606257‑606408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcggGTACAGGTTGTCGTCGTTCTCTTCCTTGTACGAGCCAACCCAGGCATCAGCCTCGCCGCGCTTGACCAGGCCAACCGCCCGGCTGTAGGGCGCGCTCTGGGTAACCACCTTGACTCCGGCCGGCTCGAACACTTTGCGCAGCACATC < NC_002947/606463‑606317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |