New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 606408	40 (0.760)	3 (0.060)	3/240	NT	7.8%	coding (236/744 nt)	PP_0521	hypothetical protein
	?	NC_002947	= 606463	33 (0.660)					coding (291/744 nt)	PP_0521	hypothetical protein

TTAGCGAGGAGTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTT  >  NC_002947/606264‑606555                                                                                                                                                 |                                                                                                                                                    ttAGCGAGGAGTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAg                                                                                                                                                 <  1:347488/149‑1 (MQ=255)  tAGCGAGGAGTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAgg                                                                                                                                                >  8:244579/1‑149 (MQ=255)         gagTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGc                                                                                                                                         >  5:281127/1‑149 (MQ=255)         gagTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGc                                                                                                                                         <  4:29484/149‑1 (MQ=255)              gCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTgg                                                                                                                                     <  6:219611/148‑1 (MQ=255)                   aCTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGc                                                                                                                               <  8:240008/149‑1 (MQ=255)                   aCTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGc                                                                                                                               <  2:276543/149‑1 (MQ=255)                     tACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTc                                                                                                                             <  2:232183/149‑1 (MQ=255)                        tctaaCGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGt                                                                                                                           <  5:257537/145‑1 (MQ=255)                        acCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTa                                                                                                                          >  4:68814/1‑149 (MQ=255)                         ccAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGAGAGGCTGATGCCTGGGTTGGCTCGTa                                                                                                                          >  8:280355/1‑148 (MQ=255)                          cAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTAc                                                                                                                         >  8:48130/1‑148 (MQ=255)                            aCGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGt                                                                                                                           >  6:257537/1‑144 (MQ=255)                             cGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAgg                                                                                                                     <  1:158981/149‑1 (MQ=255)                             cGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAgg                                                                                                                     <  7:244579/149‑1 (MQ=255)                               ccGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGaa                                                                                                                   <  6:281127/149‑1 (MQ=255)                               ccGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGGTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGaa                                                                                                                   <  2:47939/149‑1 (MQ=255)                                     gTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAac                                                                                                             <  5:297326/149‑1 (MQ=255)                                           gggTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAAcgacga                                                                                                        >  1:222114/1‑148 (MQ=255)                                            ggTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAAcgacga                                                                                                        <  4:154442/147‑1 (MQ=255)                                              tGGCCTGGGATGTGCTGCGCATAGTGTTCGAGCCGGCCGGACTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAAc                                                                                                    <  5:305369/149‑1 (MQ=255)                                              tGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAAc                                                                                                    <  7:48130/149‑1 (MQ=255)                                                     ggATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAAcc                                                                                                   >  2:224887/1‑143 (MQ=255)                                                     ggATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAAcc                                                                                                   <  1:224887/143‑1 (MQ=255)                                                      gATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACcc                                                                                            <  6:214177‑M2/149‑3 (MQ=255)                                                              gcgcAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgc                                                                                          >  6:268368‑M2/1‑139 (MQ=255)                                                              gcgcAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGACCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgcgagatc                                                                                    <  5:268368‑M2/149‑11 (MQ=255)                                                               cgcAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGgtacaggttgtcgtcgttctcttccttgtacgagccaacccaggcatcagcctcgccgcgcttga                                                                                    <  3:30945‑M1/148‑66 (MQ=255)                                                               cgcAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGc                                                                                    <  2:222114/148‑1 (MQ=255)                                                               cgcAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCa                                                                                   >  6:213952/1‑149 (MQ=255)                                                                 cAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGgtacaggttgtcgtcgttctcttccttgtacgagccaacccaggcatcagcctcgccgcgc                                                                                        <  1:190688‑M1/142‑62 (MQ=255)                                                                 cAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGgtacaggttgtcgtcgttctcttccttgtacgagccaacccaggcatcagcctcgccgcgc                                                                                        >  2:190688‑M1/1‑81 (MQ=255)                                                                 cAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACt                                                                                 >  4:231735/1‑149 (MQ=255)                                                                   aaGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTc                                                                               <  7:280355/149‑1 (MQ=255)                                                                        ttCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACAt                                                                          <  3:231735/149‑1 (MQ=255)                                                                        ttCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACAt                                                                          >  1:325263/1‑149 (MQ=255)                                                                            aGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGAc                                                                      <  2:94828/149‑1 (MQ=255)                                                                              ccggccggAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCa                                                                    <  5:214177/149‑1 (MQ=255)                                                                                            ggtggtTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATg                                                                         <  2:120064/130‑1 (MQ=255)                                                                                                     ccAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGc                                               >  7:292925/1‑147 (MQ=255)                                                                                                     ccAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCa                                             <  5:213952/149‑1 (MQ=255)                                                                                                               cccTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCtgt                                   <  3:68814/149‑1 (MQ=255)                                                                                                               cccTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCtgt                                   <  8:292925/149‑1 (MQ=255)                                                                                                                  tACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCtgtg                                  <  5:354407/147‑1 (MQ=255)                                                                                                                  tACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCtgtg                                  >  6:354407/1‑147 (MQ=255)                                                                                                                        cGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTgggg                                                    >  2:223398/1‑123 (MQ=255)                                                                                                                        cGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTgggg                                                    <  1:223398/123‑1 (MQ=255)                                                                                                                                        tCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgcgcttgaccaggccaaccgcccggctgtagggcgcgctctgggtaaccaccttgactccggccggctcgaacactttgcg           <  3:30945‑M2/148‑84 (MQ=255)                                                                                                                                        gatctcgcgggtacaggttgtcgtcgttctcttccttgtacgagccaacccaggcatcagcctcgccgcgcttgaccaggccaaccgcccggctgtaggtcgcgctctgggtaaccaccttgactccggccggctcgaacactttgcgc          <  5:268368‑M1/144‑140 (MQ=255)                                                                                                                                           aGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTAc       >  1:35489/1‑149 (MQ=255)                                                                                                                                            gcgcGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgcgcttgaccaggccaaccgcccggctgtagggcgcgctctgggtaaccaccttgactccggccggctcgaacactttg             >  2:190688‑M2/1‑61 (MQ=255)                                                                                                                                            gcgcGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgcgcttgaccaggccaaccgcccggctgtagggcgcgctctgggtaaccaccttgactccggccggctcgaacactttg             <  1:190688‑M2/142‑82 (MQ=255)                                                                                                                                              gcgGgtacaggttgtcgtcgttctcttccttgtacgagccaacccaggcatcagcctcgccgcgcttgaccaggccaaccgcccggctgtagggcgcgctctgggtaaccaccttgactccggccggctcgaacactttgcgc          >  6:268368‑M1/1‑4 (MQ=255)                                                                                                                                                gggtacaggttgtcgtcgttctcttccttgtacgagccaacccaggcatcagcctcgccgcgcttgaccaggccaaccgcccggctgtagggcgcgctctgggtaaccaccttgactccggccggctcgaacactttgcgcagcacatc  <  6:214177‑M1/149‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                                    TTAGCGAGGAGTGGCTCGACTACACCAACGCCGACGGTACCGGGGTGGCCTGGGATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTT  >  NC_002947/606264‑606555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.