New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 606408	40 (0.760)	3 (0.060)	3/240	NT	7.8%	coding (236/744 nt)	PP_0521	hypothetical protein
	?	NC_002947	= 606463	33 (0.660)					coding (291/744 nt)	PP_0521	hypothetical protein

GATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGTGCGTGGTTATGATTACGGCA  >  NC_002947/606317‑606584                                                                                                                                                   |                                                                                                                          gATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACcc                                                                                                                         <  6:214177‑M2/149‑3 (MQ=255)         gcgcAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgc                                                                                                                       >  6:268368‑M2/1‑139 (MQ=255)         gcgcAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGACCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgcgagatc                                                                                                                 <  5:268368‑M2/149‑11 (MQ=255)          cgcAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGc                                                                                                                 <  2:222114/148‑1 (MQ=255)          cgcAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCa                                                                                                                >  6:213952/1‑149 (MQ=255)            cAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACt                                                                                                              >  4:231735/1‑149 (MQ=255)              aaGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTc                                                                                                            <  7:280355/149‑1 (MQ=255)                   ttCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACAt                                                                                                       >  1:325263/1‑149 (MQ=255)                   ttCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACAt                                                                                                       <  3:231735/149‑1 (MQ=255)                       aGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGAc                                                                                                   <  2:94828/149‑1 (MQ=255)                         ccggccggAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCa                                                                                                 <  5:214177/149‑1 (MQ=255)                                       ggtggtTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATg                                                                                                      <  2:120064/130‑1 (MQ=255)                                                ccAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGc                                                                            >  7:292925/1‑147 (MQ=255)                                                ccAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCa                                                                          <  5:213952/149‑1 (MQ=255)                                                          cccTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCtgt                                                                <  8:292925/149‑1 (MQ=255)                                                          cccTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCtgt                                                                <  3:68814/149‑1 (MQ=255)                                                             tACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCtgtg                                                               >  6:354407/1‑147 (MQ=255)                                                             tACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCtgtg                                                               <  5:354407/147‑1 (MQ=255)                                                                   cGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTgggg                                                                                 <  1:223398/123‑1 (MQ=255)                                                                   cGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTgggg                                                                                 >  2:223398/1‑123 (MQ=255)                                                                                   tCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgcgcttgaccaggccaaccgcccggctgtagggcgcgctctgggtaaccaccttgactccggccggctcgaacactttgcg                                        <  3:30945‑M2/148‑84 (MQ=255)                                                                                      aGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTAc                                    >  1:35489/1‑149 (MQ=255)                                                                                       gcgcGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgcgcttgaccaggccaaccgcccggctgtagggcgcgctctgggtaaccaccttgactccggccggctcgaacactttg                                          <  1:190688‑M2/142‑82 (MQ=255)                                                                                       gcgcGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACccgcgcttgaccaggccaaccgcccggctgtagggcgcgctctgggtaaccaccttgactccggccggctcgaacactttg                                          >  2:190688‑M2/1‑61 (MQ=255)                                                                                                   tGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGga                                                    >  2:306393/1‑120 (MQ=255)                                                                                                   tGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGga                                                    <  1:306393/120‑1 (MQ=255)                                                                                                   tGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGt                                      >  2:246286/1‑134 (MQ=255)                                                                                                   tGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGCGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGt                                      <  1:246286/134‑1 (MQ=255)                                                                                                    gATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAAGCTGTACCCGCGCTGGCACTTCGACATGGACACTATCAATGCCCTGTGGCTGGCCAGCAAACCTGAGCCTACCCTGAAGACCATCGGAAAGAACAGGATGGCATGGGt                      >  7:298401/1‑149 (MQ=255)                                                                                                            ggTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGTGCGTGGtt              <  2:35489/149‑1 (MQ=255)                                                                                                                  cTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGTGCGTGGTTATGAtt        <  2:325263/149‑1 (MQ=255)                                                                                                                   tCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGTGCGTGGTTATGATTa       >  4:202603/1‑149 (MQ=255)                                                                                                                   tCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTCGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCAt                                              >  1:25224/1‑110 (MQ=255)                                                                                                                   tCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTCGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCAt                                              <  2:25224/110‑1 (MQ=255)                                                                                                                        cAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGTGCGTGGTTATGATTACGGCa  <  3:202603/149‑1 (MQ=255)                                                                                                                                   acgacgACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGTGCGTGGt               <  5:351174/125‑1 (MQ=255)                                                                                                                                   acgacgACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGTGCGTGGt               >  6:351174/1‑125 (MQ=255)                                                                                                                                             ccTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGt                      <  2:184515/108‑1 (MQ=255)                                                                                                                                             ccTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGt                      <  2:181508/108‑1 (MQ=255)                                                                                                                                             ccTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGt                      >  1:184515/1‑108 (MQ=255)                                                                                                                                             ccTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGt                      >  1:181508/1‑108 (MQ=255)                                                                                                                                                   |                                                                                                                          GATGTGCTGCGCAAAGTGTTCGAGCCGGCCGGAGTCAAGGTGGTTACCCAGAGCGCGCCCTACAGCCGGGCGGTTGGCCTGGTCAAGCGCGGCGAGGCTGATGCCTGGGTTGGCTCGTACAAGGAAGAGAACGACGACAACCTGTACCCGCGCTGGCACTTCGACATGGACCATATCTATGCCCTGGGGCTGGCCAGCAAACCTGTGCCTACCCTGGAGACCATCGGCAAGTACCGGTTGGCCTGGGTGCGTGGTTATGATTACGGCA  >  NC_002947/606317‑606584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.