| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 928888 = | 55 (1.040) | 3 (0.060) | 3/240 | NT | 6.3% | coding (16734/18933 nt) | PP_0806 | surface adhesion protein |
| ? | NC_002947 | 928940 = | 38 (0.760) | coding (16682/18933 nt) | PP_0806 | surface adhesion protein | |||||
CACTGCGCTGACCGCACCGGACCTGACCCCGCCTGCGGCTGCCGGCAACCTGCTGTTCAGTGCCGACGGCGGTACCCTCACCGGTACTGGCGAAGTGGGTGCCACCGTCACCGTACGCAGCGCCGGCGGTACCGTGCTGCAGACCGCGACGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/929041‑928888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggtgGCACCCACTTCGCCAGTACCGGTGAGGGTACCGCCGTCGGCACTGAACAGCAGGTTGCCGGCAGCCGCAGGCGGGGTCAGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGACACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGC > NC_002947/928940‑929086 CACTGCGCTGACCGCACCGGACCTGACCCCGCCTGCGGCTGCCGGCAACCTGCTGTTCAGTGCCGACGGCGGTACCCTCACCGGTACTGGCGAAGTGGGTGCCACCGTCACCGTACGCAGCGCCGGCGGTACCGTGCTGCAGACCGCGA < 1:250871/149‑1CACTGCGCTGACCGCACCGGACCTGACCCCGCCTGCGGCTGCCGGCAACCTGCTGTTCAGTGCCGACGGCGGTACCCTCACCGGTACTGGCGAAGTGGGTGCCACCGTCACCGTACGCAGCGCCGGCGGTACCGTGCTGCAGACCGCGA < 3:225599/149‑1 ACTGCGCTGACCGCACCGGACCTGACCCCGCCTGCGGCTGCCGGCAACCTGCTGTTCAGTGCCGACGGCGGTACCCTCACCGGTACTGGCGAAGTGGGTGCCACCGTCACCGTACGCAGCGCCGGCGGTACCGTGCTGCAGACCGCGAC < 7:219780/149‑1 CGCACCGGACCTGACACCGCCTGCGGCTGCCGGCAACCTGCTGTTCAGTGCCGACGGCGGTACCCTCACCGGTACTGGCGAAGTGGGTGACACCGTCACCGTACGCAGCGCCGGCGCTACCGTGCTGCAGACAGCGAag > 8:74433/1‑137 GTGCCACCGTCACCGTACGCAGCGCCGGCGGTACCGTGCTGCAGACCGCGACGGTGGCACCCACTTCGCCAGTACCGGTGAGGGTACCGCCGTCGGCACTGAACAGCAGGTTGCCGGCAGCCGCAGGCGGGGTCAGGTCCGGTGCGGTC > 3:102672/1‑149 CCGTCACCGTACGCAGCGCCGGCGGTACCGTGCTGCAGACCGCGACGGTGGCACCCACTTCGCCAGTACCGGTGAGGGTACCGCCGTCGGCACTGAACAGCAGGTTGCCGGCAGCCGCAGGCGGGGTCAGGTCCGGTGCGGTCAGCG > 5:182309/1‑147 GCAGCGCCGGCGGTACCGTGCTGCAGACCGCGACGGTGGCACCCACTTCGCCAGTACCGGTGAGGGTACCGCCGTCGGCACTGAACAGCAGGTTGCCGGCAGCCGCAGGCGGGGTCAGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGAC < 6:182309/149‑1 TGGCACCCACTTCGCCAGTACCGGTGAGGGTACCGCCGTCGGCACTGAACAGCAGGTTGCCGGCAGCCGCGGGCGGGGTCAGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGACACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGC > 8:257289/1‑149 CACTGCGCTGACCGCACCGGACCTGACCCCGCCTGCGGCTGCCGGCAACCTGCTGTTCAGTGCCGACGGCGGTACCCTCACCGGTACTGGCGAAGTGGGTGCCACCGTCACCGTACGCAGCGCCGGCGGTACCGTGCTGCAGACCGCGACGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/929041‑928888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggtgGCACCCACTTCGCCAGTACCGGTGAGGGTACCGCCGTCGGCACTGAACAGCAGGTTGCCGGCAGCCGCAGGCGGGGTCAGGTCCGGTGCGGTCAGCGCAGTGCCTGTGGACACATTACCGGCGCTGTCGGTGAGGGTGACGCTGAGC > NC_002947/928940‑929086 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |