| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1137997 = | 40 (0.760) | 3 (0.060) | 3/240 | NT | 7.6% | coding (473/930 nt) | arcC | carbamate kinase |
| ? | NC_002947 | 1138051 = | 35 (0.700) | coding (419/930 nt) | arcC | carbamate kinase | |||||
AAGTGGAAGTGGACGCCAACGACCCTGCCTTCAAGGACCCGACCAAGTTCATCGGCCCGGTCTACAGCAAGGAAGAGGCCGAGCGCCTGGCCAAGGAAAAGGGCTGGGTGGTCAAGGCCGACGGCGACAAGTACCGCCGCGTGGTAGCCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1138150‑1137997‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcccTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGTCCACTTCCACTTGGGTGAGCAAGGTGGCGAACGGCACCTCGAAGGCCAGCAGGTTGCC > NC_002947/1138051‑1138196 AAGTGGAAGTGGACGCCAACGACCCTGCCTTCAAGGACCCGACCAAGTTCATCGGCCCGGTCTACAGCAAGGAAGAGGCCGAGCGCCTGGCCAAGGAAAAGGGCTGGGTGGTCAAGGCCGACGGCGACAAGTACCGCCGCGTGGTAGC > 7:269596/1‑148 AGGAAAAGGGCTGGGTGGTCAAGGCCGACGGCGACAAGTACCGCCGCGTGGTAGCCAGCCCTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGT > 8:132107/1‑149 GGGCTGGGTGGTCAAGGCCGACGGCGACAAGTACCGCCGCGTGGTAGCCAGCCCTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCC < 8:256311/120‑1 GTGGTCAAGGCCGACGGCGACAAGTACCGCCGCGTGGTAGCCAGCCCTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGTCCACTTCCACTTGG < 7:132107/149‑1 CCAGCCCTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGTCCACTTCCACTTGGGTGAGCAAGGTGGCGAACGGCACCTCGAAGGCCAGCAGGT > 3:81852/1‑149 CCAGCCCTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGTCCACTTCCACTTGGGTGAGCAAGGTGGCGAACGGCACCTCGAAGGCCAGCAGGT > 5:362939/1‑149 CCAGCCCTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGTCCACTTCCACTTGGGTGAGCAA < 5:21520/117‑1 CCAGCCCTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGTCCACTTCCACTTGGGTGAGCAA > 6:21520/1‑117 CCCTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGTCCACTTCCACTTGGGTGAGCAAGGTGGCGAACGGCACCTCGAAGGCCAGCAGGTTGCC < 7:121831/149‑1 CCTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGTCCACTTCCACTTGGGTGAGCAAGGTGGCGAACGGCACCTCGAAGGCCAGCAGGTTGCC > 7:180473/1‑148 AAGTGGAAGTGGACGCCAACGACCCTGCCTTCAAGGACCCGACCAAGTTCATCGGCCCGGTCTACAGCAAGGAAGAGGCCGAGCGCCTGGCCAAGGAAAAGGGCTGGGTGGTCAAGGCCGACGGCGACAAGTACCGCCGCGTGGTAGCCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1138150‑1137997‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcccTTTTCCTTGGCCAGGCGCTCGGCCTCTTCCTTGCTGTAGACCGGGCCGATGAACTTGGTCGGGTCCTTGAAGGCAGGGTCGTTGGCGTCCACTTCCACTTGGGTGAGCAAGGTGGCGAACGGCACCTCGAAGGCCAGCAGGTTGCC > NC_002947/1138051‑1138196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |