| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1214538 = | 45 (0.850) | 4 (0.080) | 4/240 | NT | 8.4% | coding (2421/4305 nt) | PP_1061 | ATP‑dependent DNA helicase |
| ? | NC_002947 | 1214614 = | 45 (0.900) | coding (2345/4305 nt) | PP_1061 | ATP‑dependent DNA helicase | |||||
CCACAAATCCAGCGCATGAAGAGTGAGGACCTGGTTGCCGCCGTGTTCCCTGACCAGATCGCCTGCCTGGAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAGGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1214687‑1214538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgatgTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCT > NC_002947/1214614‑1214736 CCACAAATCCAGCGCATGAAGAGTGAGGACCTGGTTGCCGCCGTGTTCCCTGACCAGATCGCCTGCCTGGAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAGGCGAT > 1:201131/1‑149CCACAAATCCAGCGCATGAAGAGTGAGGACCTGGTTGCCGCCGTGTTCCCTGACCAGATCGCCTGCCTGGAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAGGCGAT > 1:271120/1‑149 CACAAATCCAGCGCATGAAGAGTGAGGACCTGGTTGCCGCCGTGTTCCCTGACCAGATCGCCTGCCTGGAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAGGCGATG < 2:201131/149‑1 ACAAATCCAGCGCATGAAGAGTGAGGACCTGGTTGCCGCCGTGTTCCCTGACCAGATCGCCTGCCTGGAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAGGCGATG > 5:169617/1‑148 ACCAGATCGCCTGCCTGGAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAG > 5:187790/1‑92 ACCAGATCGCCTGCCTGGAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAG < 6:187790/92‑1 GCCTGGAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGC > 4:70178/1‑149 GAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGAT > 7:162233/1‑149 ACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGT < 3:70178/149‑1 GACGATTGCCTGCACGAGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCT < 8:162233/147‑1 CCACAAATCCAGCGCATGAAGAGTGAGGACCTGGTTGCCGCCGTGTTCCCTGACCAGATCGCCTGCCTGGAGAACATCGCCGGCGAGCGGCAGATTCCCGACCATCCGCTGGTCGAGCAAACCCTCGACGATTGCCTGCACGAGGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1214687‑1214538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgatgTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCT > NC_002947/1214614‑1214736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |