New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1214538 =	45 (0.850)	4 (0.080)	4/240	NT	8.4%	coding (2421/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1214614 =	45 (0.900)					coding (2345/4305 nt)	PP_1061	ATP‑dependent DNA helicase

TTCCAGTGGCGCATCGTCCAGAAAGGCATAAGGCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTG  >  NC_002947/1214391‑1214686                                                                                                                                                    |                                                                                                                                                     ttcCAGTGGCGCATCGTCCAGAAAGGCATAAGGCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCa                                                                                                                                                     >  7:43013/1‑149 (MQ=255)         gcgcATCGTCCAGAAAGGCATAAGGCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTACACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTc                                                                                                                                              <  6:223134/148‑1 (MQ=255)              tCGTCCAGAAAGGCATAAGGCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAg                                                                                                                                        <  5:125617/149‑1 (MQ=255)                gTCCAGAAAGGCATAAGGCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAgg                                                                                                                                       <  8:208648/148‑1 (MQ=255)                 tCCAGAAAGGCATAAGGCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGc                                                                                                                                      >  2:313872/1‑148 (MQ=255)                   cAGAAAGGCATAAGGCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAAt                                                                                                                                   >  4:325593/1‑149 (MQ=255)                     gAAAGGCATAAGGCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAAtcg                                                                                                                                 >  6:169617/1‑149 (MQ=255)                         aggcgtggccatggcactgccgcgctttgtgggcggacgcaaggtggcgccacaaatccagcgcatgaagagtgaggacctggttgccgccgtgttccctgaccagatcgcctgcctggagaaCATCGCCTCGTGCAGGCAAtcgtc                                                                                                                               <  8:162233‑M1/24‑1 (MQ=255)                                ggCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTg                                                                                                                      <  1:313872/149‑1 (MQ=255)                                ggCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTg                                                                                                                      >  1:341164/1‑149 (MQ=255)                                              aaTCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTc                                                                                                                   <  3:312669/138‑1 (MQ=255)                                              aaTCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTc                                                                                                                   >  4:312669/1‑138 (MQ=255)                                                    tGATGCCAGCTGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCgg                                                                                                  <  7:299298/149‑1 (MQ=255)                                                      aTGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCATCCGCTGGTCga                                                                                                  <  6:225746/147‑2 (MQ=255)                                                      aTGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCgg                                                                                                  >  8:299298/1‑147 (MQ=255)                                                         ccAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAAt                                                                                              <  3:325593/148‑1 (MQ=255)                                                          cAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCt                                                                                            >  4:309829/1‑149 (MQ=255)                                                          aaGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTCCTCAACAAGCGGATGGACCGGAATCt                                                                                            >  2:308246/2‑149 (MQ=255)                                                           aGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTg                                                                                           >  4:97485/1‑149 (MQ=255)                                                             cggcgAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGcc                                                                                         <  3:97485/149‑1 (MQ=255)                                                                       gcgggcAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGc                                                                               >  2:224911/1‑149 (MQ=255)                                                                       gcgggcAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGc                                                                               <  2:341164/149‑1 (MQ=255)                                                                          ggcAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGAt                                                                            <  8:43013/149‑1 (MQ=255)                                                                           gcAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCggg                                                                                                 <  2:49163/127‑1 (MQ=255)                                                                           gcAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCggg                                                                                                 >  1:49163/1‑127 (MQ=255)                                                                            acaaatccagcgcatgaagagtgaggacctggttgccgccgtgttccctgaccagatcgcctgcctggagaaCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGt                                                                          <  3:70178‑M1/77‑1 (MQ=255)                                                                             aGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAAt                                                                                              >  7:10939/1‑128 (MQ=255)                                                                             aGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAAt                                                                                              <  8:10939/128‑1 (MQ=255)                                                                                atccagcgcatgaagagtgaggacctggttgccgccgtgttccctgaccagatcgcctgcctggagaaCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTtctc                                                                      >  7:162233‑M1/69‑149 (MQ=255)                                                                                  ccGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGTGTTTGCTCGACCAGCGGATTGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCca                                                                    <  1:40611/149‑1 (MQ=255)                                                                                  ccGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTtctc                                                                      >  8:196753/1‑147 (MQ=255)                                                                                  ccGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCca                                                                    <  7:196753/149‑1 (MQ=255)                                                                                    ggCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCcagg                                                                  >  2:271120/1‑149 (MQ=255)                                                                                     gcgcatgaagagtgaggacctggttgccgccgtgttccctgaccagatcgcctgcctggagaaCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCcaggc                                                                 >  4:70178‑M1/64‑149 (MQ=255)                                                                                               cgcACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATTGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg                                                       <  1:308246/149‑1 (MQ=255)                                                                                                      cACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCt                                                        >  2:330497/1‑141 (MQ=255)                                                                                                      cACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCt                                                        <  1:330497/141‑1 (MQ=255)                                                                                                      cACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAggg                                                <  3:309829/149‑1 (MQ=255)                                                                                                       aCCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCcaggcag                                                               >  4:133065/1‑133 (MQ=255)                                                                                                           cTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATc                                                         >  7:49019/1‑135 (MQ=255)                                                                                                           cTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATc                                                         <  8:49019/135‑1 (MQ=255)                                                                                                                cATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACAcggcg                                       <  1:224911/148‑1 (MQ=255)                                                                                                                 aTACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTACTCCAGGCAGGCGATCTGGTCAGGGAACAcggcgg                                      >  6:61898/1‑148 (MQ=255)                                                                                                                  tACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg                                                       >  2:250127/1‑130 (MQ=255)                                                                                                                  tACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg                                                       <  1:250127/130‑1 (MQ=255)                                                                                                                           gcagGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCcaggcagg                                                              >  2:68423/1‑114 (MQ=255)                                                                                                                                   agccagccTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCtt                   >  1:344809/1‑149 (MQ=255)                                                                                                                                        gccTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATgc              >  2:213724/1‑149 (MQ=255)                                                                                                                                          cTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATgcgc            >  5:42647/1‑149 (MQ=255)                                                                                                                                          cTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATgcgc            >  3:197395/1‑149 (MQ=255)                                                                                                                                               cTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg                                                       <  6:197914/101‑1 (MQ=255)                                                                                                                                                tGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg                                                       >  4:75383/1‑100 (MQ=255)                                                                                                                                                tGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg                                                       <  3:75383/100‑1 (MQ=255)                                                                                                                                                    CATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTtgtg  <  2:201131‑M1/149‑1 (MQ=255)                                                                                                                                                    CATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTtgt   >  5:169617‑M1/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                     TTCCAGTGGCGCATCGTCCAGAAAGGCATAAGGCCGGGCGTTGAGAATCGCTGATGCCAGCGGCGAGGGGGCGGGCAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTG  >  NC_002947/1214391‑1214686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.