New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1214538 = | 45 (0.850) | 4 (0.080) | 4/240 | NT | 8.4% | coding (2421/4305 nt) | PP_1061 | ATP‑dependent DNA helicase |
? | NC_002947 | 1214614 = | 45 (0.900) | coding (2345/4305 nt) | PP_1061 | ATP‑dependent DNA helicase |
CAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAA > NC_002947/1214466‑1214762 | acaaatccagcgcatgaagagtgaggacctggttgccgccgtgttccctgaccagatcgcctgcctggagaaCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGt < 3:70178‑M1/77‑1 (MQ=255) atccagcgcatgaagagtgaggacctggttgccgccgtgttccctgaccagatcgcctgcctggagaaCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTtctc > 7:162233‑M1/69‑149 (MQ=255) ccGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGTGTTTGCTCGACCAGCGGATTGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCca < 1:40611/149‑1 (MQ=255) ccGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTtctc > 8:196753/1‑147 (MQ=255) ccGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCca < 7:196753/149‑1 (MQ=255) ggCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCcagg > 2:271120/1‑149 (MQ=255) gcgcatgaagagtgaggacctggttgccgccgtgttccctgaccagatcgcctgcctggagaaCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCcaggc > 4:70178‑M1/64‑149 (MQ=255) cgcACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATTGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg < 1:308246/149‑1 (MQ=255) cACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCt < 1:330497/141‑1 (MQ=255) cACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCt > 2:330497/1‑141 (MQ=255) cACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAggg < 3:309829/149‑1 (MQ=255) aCCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCcaggcag > 4:133065/1‑133 (MQ=255) cTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATc < 8:49019/135‑1 (MQ=255) cTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATc > 7:49019/1‑135 (MQ=255) cATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACAcggcg < 1:224911/148‑1 (MQ=255) aTACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTACTCCAGGCAGGCGATCTGGTCAGGGAACAcggcgg > 6:61898/1‑148 (MQ=255) tACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg < 1:250127/130‑1 (MQ=255) tACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg > 2:250127/1‑130 (MQ=255) gcagGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCcaggcagg > 2:68423/1‑114 (MQ=255) agccagccTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCtt > 1:344809/1‑149 (MQ=255) gccTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATgc > 2:213724/1‑149 (MQ=255) gcctggagaacatcgccggcgagcggcagattcccgaccatccgctggtcgagcaaaccctcgacgattgcctgcacgaggcgatgTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATgcgc > 4:70178‑M2/87‑149 (MQ=255) cTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATgcgc > 3:197395/1‑149 (MQ=255) cTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATgcgc > 5:42647/1‑149 (MQ=255) gagaacatcgccggcgagcggcagattcccgaccatccgctggtcgagcaaaccctcgacgattgcctgcacgaggcgatgTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGAt > 7:162233‑M2/82‑149 (MQ=255) cTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg < 6:197914/101‑1 (MQ=255) tGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg < 3:75383/100‑1 (MQ=255) tGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTg > 4:75383/1‑100 (MQ=255) acatcgccggcgagcggcagattcccgaccatccgctggtcgagcaaaccctcgacgattgcctgcacgaggcgatgTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTtgt < 3:70178‑M2/72‑1 (MQ=255) CATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTtgtg < 2:201131‑M1/149‑1 (MQ=255) CATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTtgt > 5:169617‑M1/1‑148 (MQ=255) ATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTgg > 1:271120‑M1/1‑149 (MQ=255) ATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTgg > 1:201131‑M1/1‑149 (MQ=255) CTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGt > 5:187790‑M1/1‑92 (MQ=255) CTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGt < 6:187790‑M1/92‑1 (MQ=255) tCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTtgtg < 4:299263/142‑1 (MQ=255) tCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTtgtg > 3:299263/1‑142 (MQ=255) ccgatgtcgtcgAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGc < 7:173850/142‑1 (MQ=255) ggCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGt < 4:197395/149‑1 (MQ=255) gtcgAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTACAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTCTGTCGCCACCttcc > 8:173850/1‑138 (MQ=255) tcgAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCtt < 4:310717/137‑1 (MQ=255) tcgAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCtt > 3:310717/1‑137 (MQ=255) aGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCCGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGTCGCCACCTTGCGTCCGCCCACaaa > 7:332947/1‑149 (MQ=255) cGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGt > 8:13995/1‑149 (MQ=255) gCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGgcgc > 4:248091/1‑112 (MQ=255) gCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGgcgc < 3:248091/112‑1 (MQ=255) ggATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGc < 6:42647/149‑1 (MQ=255) gATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGgc > 5:243776/1‑107 (MQ=255) gATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGgc < 6:243776/107‑1 (MQ=255) gATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCgg > 2:315788/1‑136 (MQ=255) gATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCgg < 1:315788/136‑1 (MQ=255) gggAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCt < 2:344809/148‑1 (MQ=255) gggAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTg > 7:244740/1‑149 (MQ=255) gacgattgcctgcacgaggcgatgTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCt < 8:162233‑M2/123‑1 (MQ=255) aaTCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCa > 5:280590/1‑148 (MQ=255) aTCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCAtt < 6:328458/149‑1 (MQ=255) aTCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCAtt > 5:328458/1‑149 (MQ=255) cTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTc > 1:8086/1‑148 (MQ=255) gCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTccag > 1:53230/1‑149 (MQ=255) gCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTccagcgccagc > 8:69174/1‑149 (MQ=255) ttCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCaaa < 7:13995/149‑1 (MQ=255) | CAGATCCCGGCACAGCAAGCGCACTGCACCGCTTTCCATACGCCGCAGCAGGGCCAGCCAGCCTTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGATGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAA > NC_002947/1214466‑1214762 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |