| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1286951 = | 38 (0.720) | 3 (0.060) | 3/240 | NT | 7.2% | coding (334/2145 nt) | PP_1125 | putative Helicase |
| ? | NC_002947 | 1286997 = | 42 (0.840) | coding (380/2145 nt) | PP_1125 | putative Helicase | |||||
GCTCGTCGACTTCGATGCGGAAGCCTTCTTCCTCGAACAACTGGGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1287101‑1286951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgctATCTGTGCCTGTCCAAGCTCGACATCCTGTTGCAGGAAGGCCACGCCCAGTCAGCCACGGCCCAGTTGTTCGAGGAAGAAGGCTTCCGCATCGAAGTCGACGAGCGCAGCCAGAAGCTGTTCAACAGCATGATCGAGAAGCTTGCCGG > NC_002947/1286997‑1287144 GCTCGTCGACTTCGATGCGGAAGCCTTCTTCCTCGAACAACTGGGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCG > 5:85458/1‑149GCTCGTCGACTTCGATGCGGAAGCCTTCTTCCTCGAACAACTGGGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCG > 7:334797/1‑149 AGATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCGCTATCTGTGCCTGTCCAAGCTCGACATCCTGTTGCAGGAAGGCCACGCCCAGTCAGCCACGGCCCAGTTGTTCGAGGAAGAAGGCTTCCGCATCGAAGTC > 2:147509/1‑148 ATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCGCTATCTGTGCCTGTCCAAGCTCGACATCCTGTTGCAGGAAGGCCACGCCCAGTCAGCCACGGCCCAGTTGTTCGAGGAAGAAGGCTTCCGCATCGAA < 5:162165/143‑1 ATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCGCTATCTGTGCCTGTCCAAGCTCGACATCCTGTTGCAGGAAGGCCACGCCCAGTCAGCCACGGCCCAGTTGTTCGAGGAAGAAGGCTTCCGCATCGAA > 6:162165/1‑143 TATCTGTGCCTGTCCAAGCTCGACATCCTGTTGCAGGAAGGCCACGCCCAGTCAGCCACGGCCCAGTTGTTCGAGGAAGAAGGCTTCCGCATCGAAGTCGACGAGCGCAGCCAGAAGCTGTTCAACAGCATGATCGAGAAGCTTGCCGG > 5:142206/1‑149 GCTCGTCGACTTCGATGCGGAAGCCTTCTTCCTCGAACAACTGGGCCGTGGCTGACTGGGCGTGGCCTTCCTGCAACAGGATGTCGAGCTTGGACAGGCACAGATAGCGGCCACGGCCCTTGGCCAGGGCGAAGCTGAAGTTGAGGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1287101‑1286951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgctATCTGTGCCTGTCCAAGCTCGACATCCTGTTGCAGGAAGGCCACGCCCAGTCAGCCACGGCCCAGTTGTTCGAGGAAGAAGGCTTCCGCATCGAAGTCGACGAGCGCAGCCAGAAGCTGTTCAACAGCATGATCGAGAAGCTTGCCGG > NC_002947/1286997‑1287144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |