| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1682222 | 36 (0.680) | 4 (0.080) | 3/236 | NT | 9.0% | coding (741/1710 nt) | recJ | ssDNA‑specific exonuclease RecJ |
| ? | NC_002947 | = 1682252 | 47 (0.960) | coding (771/1710 nt) | recJ | ssDNA‑specific exonuclease RecJ | |||||
GATGGCCCTGCGCGCTCGCTTGCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1682066‑1682222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgag‑G‑‑‑CCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGTGCACCAGGATGCGGTTGTTGGCATCCAGCGGCACCACGTCAGCAACACTGCCCAGCGCCACCAGATCGAGCAGTTCGCCAATGTTCGGCTGTGGCTGC < NC_002947/1682252‑1682111 GATGGCCCTGCGCGCTCGCTTGCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAG > 4:223573/1‑149 CCCTGCGCGCTCGCTTGCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTT > 8:5309/1‑149 CCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAG < 3:246172/130‑1 CCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAG < 3:246454/130‑1 CCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAG > 4:246172/1‑130 CCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAG > 4:246454/1‑130 AGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGGGCCGGGCGCGGCCGGCGCGGATGC < 7:5309/149‑1 GCCACAGCCGAACATTGGCGACCTGCTCGCTCTGGTGGCGCTGGGCAGTGGTGCTGACGTGGGGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAG‑G‑‑‑CCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCT < 3:226673/149‑1 GGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAG‑G‑‑‑CCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGT < 7:144829/111‑1 GGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAG‑G‑‑‑CCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGT > 8:144829/1‑111 CCTTGAG‑G‑‑‑CCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGTGCACCAGGATGCGGTTGTTGGCATCCAGCGGCACCACGTCAGCAACACTGCCCAGCGCCACCAGATCGAGCAGTTCGCCAATGTTCGGCTGTGGCTGC > 4:257062/1‑149 GATGGCCCTGCGCGCTCGCTTGCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1682066‑1682222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgag‑G‑‑‑CCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGTGCACCAGGATGCGGTTGTTGGCATCCAGCGGCACCACGTCAGCAACACTGCCCAGCGCCACCAGATCGAGCAGTTCGCCAATGTTCGGCTGTGGCTGC < NC_002947/1682252‑1682111 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |