New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 168222236 (0.680)4 (0.080) 3/236 NT 9.0% coding (741/1710 nt) recJ ssDNA‑specific exonuclease RecJ
?NC_002947 = 1682252 47 (0.960)coding (771/1710 nt) recJ ssDNA‑specific exonuclease RecJ

CGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGCCTGCTGTGCGAGGACGCGG  >  NC_002947/1682105‑1682400
                                                                                                                                                      |                                                                                                                                                    
cGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCccggcccgg‑‑‑c                                                                                                                                                      <  1:6339/148‑1 (MQ=255)
      gcAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑Cctcaagg                                                                                                                                               >  4:257062‑M2/1‑142 (MQ=255)
             caGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCt                                                                                                                                        >  1:85178/1‑149 (MQ=255)
                ccGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCtt                                                                                                                                       >  2:38604/1‑147 (MQ=255)
                ccGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGa                                                                                                                                     <  2:85178/149‑1 (MQ=255)
                   aaCATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCAt                                                                                                                                           >  1:207757/1‑140 (MQ=255)
                   aaCATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCAt                                                                                                                                           <  2:207757/140‑1 (MQ=255)
                          gCGAACTGCTAGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTggcgcgg                                                                                                                           >  7:8655/1‑149 (MQ=255)
                             aaCTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGGCATCCTTGAGGTggcgcggcgc                                                                                                                        <  8:8655/149‑1 (MQ=255)
                             aaCTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTggcgcggcgc                                                                                                                        <  6:92219/149‑1 (MQ=255)
                             aaCTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTggcgcggcgc                                                                                                                        <  4:140190/149‑1 (MQ=255)
                                tGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCTTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGAt                                                                                                                     >  3:248826/1‑149 (MQ=255)
                                   tCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCAc                                                                                                                  >  4:98153/1‑149 (MQ=255)
                                     gATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCg                                                                                                                >  6:90378/1‑149 (MQ=255)
                                                 cTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTc                                                                                                    >  3:270848/1‑149 (MQ=255)
                                                    ggCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGTCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGAc                                                                                                 <  5:90378/149‑1 (MQ=255)
                                                        gtggtgCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCTGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGAc                                                                                             <  7:205320/149‑1 (MQ=255)
                                                                   gtggtgCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCAt                                                                                  >  5:63751/1‑149 (MQ=255)
                                                                         ccGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCgg                                                                            <  3:98153/149‑1 (MQ=255)
                                                                         ccGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCAGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCgg                                                                            >  2:196998/1‑149 (MQ=255)
                                                                           gCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGtt                                                                                      <  8:324894/137‑1 (MQ=255)
                                                                           gCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGtt                                                                                      >  7:324894/1‑137 (MQ=255)
                                                                                aTGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCAGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACgg                                                                     <  1:196998/149‑1 (MQ=255)
                                                                                        aacCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGgc                                                                                                              <  4:185724/100‑1 (MQ=255)
                                                                                        aacCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGgc                                                                                                              >  3:185724/1‑100 (MQ=255)
                                                                                          ccGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATgccg                                                           >  5:331004/1‑149 (MQ=255)
                                                                                           cGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATgccgc                                                          >  4:135854/1‑149 (MQ=255)
                                                                                                    gTGCACCAAGGCTTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCt                                                 <  4:248826/149‑1 (MQ=255)
                                                                                                      gCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCGTCGGCCCACGGTTGAATGCCGCCGGGCGCCTg                                                >  4:90404/1‑148 (MQ=255)
                                                                                                        aCCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑Cctcaaggccttggtgcaccaggatgcggttgttggcatccagcggcaccacgtcagcaacactgccc                                                                                   <  7:144829‑M2/111‑68 (MQ=255)
                                                                                                        aCCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑Cctcaaggccttggtgcaccaggatgcggttgttggcatccagcggcaccacgtcagcaacactgccc                                                                                   >  8:144829‑M2/1‑44 (MQ=255)
                                                                                                        aCCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAAt                                                               <  5:88938/131‑1 (MQ=255)
                                                                                                        aCCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAAt                                                               >  6:88938/1‑131 (MQ=255)
                                                                                                          cAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGgacga                                           <  6:63751/149‑1 (MQ=255)
                                                                                                            aGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑Cctcaaggccttggtgcaccaggatgcggttgttggcatccagcggccccacgtcagcaccactgcccagcgccaccagagcgagcaggtcgccaatgttcggctgtggc                                         <  3:226673‑M2/149‑110 (MQ=255)
                                                                                                            aGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACa                                         <  8:215387/149‑1 (MQ=255)
                                                                                                               ccTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACAt                                        >  8:278459/1‑147 (MQ=255)
                                                                                                                cTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAg                                     >  8:270576/1‑149 (MQ=255)
                                                                                                                     gcgcATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTgg                                >  4:54915/1‑149 (MQ=255)
                                                                                                                     gcgcATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTgg                                <  1:38604/149‑1 (MQ=255)
                                                                                                                      cgcATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCt                                                 <  8:313122/131‑1 (MQ=255)
                                                                                                                      cgcATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCt                                                 >  7:313122/1‑131 (MQ=255)
                                                                                                                       gcATCCGCGCCGGCCGCGCCCGGCCCGGATGCgctcaaggccttggtgcaccaggatgcggttgttggcatccagcggcaccacgtcagcaacactgcccagcgccaccagatcgagcagttcgccaatgttcggctgtggctgcgcct                                 <  7:5309‑M2/149‑118 (MQ=255)
                                                                                                                       gcATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACa                                         <  6:318143/138‑1 (MQ=255)
                                                                                                                       gcATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACa                                         >  5:318143/1‑138 (MQ=255)
                                                                                                                            cgcgCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCGTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGa                         <  3:90404/149‑1 (MQ=255)
                                                                                                                             gcgcCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGaa                        <  3:135854/149‑1 (MQ=255)
                                                                                                                             gcgcCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGaa                        >  8:20070/1‑149 (MQ=255)
                                                                                                                              cgcCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAAt                       <  4:270848/149‑1 (MQ=255)
                                                                                                                                    ccgCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGCctgc                 >  7:332296/1‑149 (MQ=255)
                                                                                                                                          ccggcccgg‑‑‑cCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGcc                    <  3:53334/140‑1 (MQ=255)
                                                                                                                                          ccggcccgg‑‑‑cCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGcc                    >  4:53334/1‑140 (MQ=255)
                                                                                                                                          ccggcccgg‑‑‑cCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGCCTGCTGTGCg           >  5:228291/1‑149 (MQ=255)
                                                                                                                                           cggcccgg‑‑‑ccTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGCCTGCTGTGCGa          <  1:280619/149‑1 (MQ=255)
                                                                                                                                           cggcccgg‑‑‑ccTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGCCTGCTGTGCGa          <  3:54915/149‑1 (MQ=255)
                                                                                                                                            ggcccgg‑‑‑ccTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGCCTGCTGTGCGAg         <  7:278459/149‑1 (MQ=255)
                                                                                                                                               ccgg‑‑‑ccTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAAt                       >  2:306612/1‑132 (MQ=255)
                                                                                                                                               ccgg‑‑‑ccTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAAt                       <  1:306612/132‑1 (MQ=255)
                                                                                                                                                      ccTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGCCTGCTGTGCGAGGACgcgg  <  7:270576/149‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
CGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGCCGCGCCCGGCCCGG‑‑‑CCTCAAGGCCATCCTTGAGGTGGCGCGGCGCGATCACCGGCGCATCACTTCGACTGACCTTGGTTTCATCCTCGGCCCACGGTTGAATGCCGCCGGGCGCCTGGACGACATGAGCCTGGGCATCGAATGCCTGCTGTGCGAGGACGCGG  >  NC_002947/1682105‑1682400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.