New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1710542 | 44 (0.830) | 3 (0.060) | 3/246 | NT | 6.3% | coding (1161/2628 nt) | ppc | phosphoenolpyruvate carboxylase |
? | NC_002947 | = 1710566 | 47 (0.920) | coding (1185/2628 nt) | ppc | phosphoenolpyruvate carboxylase |
CGGTGCCGACGTGCTGGTGGACAACCGCGAGCTGATCGCGCCGCTGGAGCTGTGCTACCAGTCACTGCACGAATGCGGTATGGGCGTGATCGCCGAGGGGCCGCTGCTCGACTGCTTGCGTCGTGCGGTGACCTTCGGCCTGTTCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1710392‑1710542 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGCGTCCTGGCGTACGTCCAGGCGGCCCAGGAACAGGCCGAAGGTCACCGCACGACGCAAGCAGTCGAGCAGCGGCCCCTCGGCGATCACGCCCATACCGCATTCGTGCAGTGACTGGTAGCACAGCTCCAGCGGCGCGATCAGC < NC_002947/1710566‑1710422 CGGTGCCGACGTGCTGGTGGACAACCGCGAGCTGATCGCGCCGCTGGAGCTGTGCTACCAGTCACTGCACGAATGCGGTATGGGCGTGATCGCCGAGGGGCCGCTGCTCGACTGCTTGCGTCGTGCGGTGACCTTCGGCCTGTTCCTGG < 1:64375/149‑1 GCCGCTGGAGCTGTGCTACCAGTCACTGCACGAATGCGGTATGGGCGTGATCGCCGAGGGGCCGCTGCTCGACTGCTTGCGTCGTGCGGTGACCTTCGGCCTGTTCCTGGGCAGCGTCCTGGCGTACGTCCAGGCGGCCCAGGAACAGG < 8:260009/149‑1 TGCTACCAGTCACTGCACGAATGCGGTATGGGCGTGATCGCCGAGGGGCCGCTGCTCGACTGCTTGCGTCGTGCGGTGACCTTCGGCCTGTTCCTGGGCAGCGTCCTGGCGTACGTCCAGGCGGCCCAG > 7:92103/1‑129 TGCTACCAGTCACTGCACGAATGCGGTATGGGCGTGATCGCCGAGGGGCCGCTGCTCGACTGCTTGCGTCGTGCGGTGACCTTCGGCCTGTTCCTGGGCAGCGTCCTGGCGTACGTCCAGGCGGCCCAG < 8:92103/129‑1 GGGCAGCGTCCTGGCGTACGTCCAGGCGGCCCAGGAACAGGCCGAAGGTCACCGCACGACGCAAGCAGTCGAGCAGCGGCCCCTCGGCGATCACGCCCATACCGCATTCGTGCAGTGACTGGTAGCACAGCTCCAGCGGCGCGATCAGC > 5:116991/1‑149 CGGTGCCGACGTGCTGGTGGACAACCGCGAGCTGATCGCGCCGCTGGAGCTGTGCTACCAGTCACTGCACGAATGCGGTATGGGCGTGATCGCCGAGGGGCCGCTGCTCGACTGCTTGCGTCGTGCGGTGACCTTCGGCCTGTTCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1710392‑1710542 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGCGTCCTGGCGTACGTCCAGGCGGCCCAGGAACAGGCCGAAGGTCACCGCACGACGCAAGCAGTCGAGCAGCGGCCCCTCGGCGATCACGCCCATACCGCATTCGTGCAGTGACTGGTAGCACAGCTCCAGCGGCGCGATCAGC < NC_002947/1710566‑1710422 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |