| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2409395 = | 84 (1.590) | 4 (0.080) | 4/236 | NT | 5.3% | coding (2053/2742 nt) | acnA‑I | aconitate hydratase |
| ? | NC_002947 | 2409472 = | 64 (1.300) | coding (1976/2742 nt) | acnA‑I | aconitate hydratase | |||||
TGCCGGTGATGCGCAATGGCAGGCCATCGAGGTGCCACAGGCCGCCACTTACGTGTGGCAGGCTGACTCCACCTACATCCAGCACCCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2409549‑2409395‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgctggATGTAGGTGGAGTCAGCCTGCCACACGTAAGTGGCGGCCTGTGGCACCTCGATGGCCTGCCATTGCGCATCACCGGCAAACACTTCGGCGTACTCCTTGTGGAACATCGCCGTATCGACCTTGGCCACGGCCTCGGCAATTTCCTG > NC_002947/2409472‑2409617 tggCGGTGATGAGCTATGGCAGGCCATCGAGGTGCCACAGGCCTCCACTTACGTGTGGCAGGCTGACTCCACCTACATCCAGCACCGACCGTTCTTCGACGGCATCGGCGGGCCGCCTCCACAAATTGCCAATATTCACGGCGCACGG < 2:96773/145‑1TGCCGGTGATGCGCAATGGCAGGCCATCGAGGTGCCACAGGCCGCCACTTACGTGTGGCAGGCTGACTCCACCTACATCCAGCACCCACTGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGG < 2:204771/148‑1TGCCGGTGATGCGCAATGGCAGGCCATCGAGGTGCCACAGGCCGCCACTTACGTGTGGCAGGCTGACTCCACCTACATCCAGCACCCACCGTTCTTCGACGGCATTGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGG > 4:236157/1‑149 GCCGGTGATGCGCAATGGCAGGCCATCGAGGTGCCACAGGCCGCCACTTACGTGTGGCAGGCTGACTCCACCTACATCCAGCACCCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGT > 5:363169/1‑149 CCGGTGATGCGCAATGGCAGGCCATCGAGGTGCCACAGGCCGCCACTTACGTGTGGCAGGCTGACTCCACCTACATCCAGCACCCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGTG > 4:143845/1‑149 TGATGCGCAATGGCAGGCCATCGAGGTGCCACAGGCCGCCACTTACGTGTGGCAGGCTGACTCCACCTACATCCAGCACCCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGTGCTGG < 3:143845/149‑1 TGATGCGCAATGGCAGGCCATCGAGGTGCCACAGGCCGCCACTTACGTGTGGCAGGCTGACTCCACCTACATCCAGCACCCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGTGCTGG > 8:111785/1‑149 ATCCAGCACCCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGTGCTGGATGTAGGTGGAGTCAGCCTGCCACACGTAAGTGGCGGCCTGTGG < 5:65143/123‑1 ATCCAGCACCCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGTGCTGGATGTAGGTGGAGTCAGCCTGCCACACGTAAGTGGCGGCCTGTGG > 6:65143/1‑123 CCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGTGCTGGATGTAGGTGGAGTCAGCCTGCCACACGTAAGTGGCGGCCTGTGGCACCTCGATGGCCT > 1:56807/1‑128 CCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGTGCTGGATGTAGGTGGAGTCAGCCTGCCACACGTAAGTGGCGGCCTGTGGCACCTCGATGGCCT < 2:56807/128‑1 GGATGTAGGTGGAGTCAGCCTGCCACACGTAAGTGGCGGCCTGTGGCACCTCGATGGCCTGCCATTGCGCATCACCGGCAAACACTTCGGCGTACTCC > 1:97336/1‑98 GGATGTAGGTGGAGTCAGCCTGCCACACGTAAGTGGCGGCCTGTGGCACCTCGATGGCCTGCCATTGCGCATCACCGGCAAACACTTCGGCGTACTCC < 2:97336/98‑1 GATGTAGGTGGAGTCAGCCTGCCACACGTAAGTGGCGGCCTGTGGCACCTCGATGGCCTGCCATTGCGCATCACCGGCAAACACTTCGGCGTACTCCTTGTGGAACATCGCCGTATCGACCTTGGCCACGGCCTCGGCAATTTCCTG < 2:236978/147‑1 TGCCGGTGATGCGCAATGGCAGGCCATCGAGGTGCCACAGGCCGCCACTTACGTGTGGCAGGCTGACTCCACCTACATCCAGCACCCACCGTTCTTCGACGGCATCGGCGGGCCGCCGCCACAAATTGCCAATATTCACGGCGCACGGGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2409549‑2409395‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgctggATGTAGGTGGAGTCAGCCTGCCACACGTAAGTGGCGGCCTGTGGCACCTCGATGGCCTGCCATTGCGCATCACCGGCAAACACTTCGGCGTACTCCTTGTGGAACATCGCCGTATCGACCTTGGCCACGGCCTCGGCAATTTCCTG > NC_002947/2409472‑2409617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |