| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2735070 | 42 (0.800) | 3 (0.060) | 3/242 | NT | 7.1% | coding (1968/4422 nt) | PP_2394 | leucine‑rich repeat‑containing protein |
| ? | NC_002947 | = 2735102 | 39 (0.780) | coding (2000/4422 nt) | PP_2394 | leucine‑rich repeat‑containing protein | |||||
CCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGATTGGTACGTTGGTCAACCAGTTGCGCGAGGGCGGTGTAACCGCAGACCCGCAACTGCTGGAGCGGGTCATGCGCCTTCCACAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2734933‑2735070‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagccACATCGGCCAACGCTGCTCCTTCCTTGCCGGCGGCTTGTGGAAGGCGCATGACCCGCTCCAGCAGTTGCGGGTCTGCGGTTACACCGCCCTCGCGCAACTGGTTGACCAACGTACCAATCCTGCCGGCGAGCCGCACGCGCGTG < NC_002947/2735102‑2734959 CCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGATTGGTACGTTGGTCAACCAGTTGCGCGAGGGCGGTGTAACCGCAGACCCGCAACTGCTGGAGCGGGTCATGCGCCTTCCAC > 1:54864/1‑133CCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGATTGGTACGTTGGTCAACCAGTTGCGCGAGGGCGGTGTAACCGCAGACCCGCAACTGCTGGAGCGGGTCATGCGCCTTCCAC < 2:54864/133‑1 CGCGCGTGCGGCTCGCCGGCAGGATTGGTACGTTGGTCAACCAGTTGCGCGAGGGCGGTGTAACCGCAGACCCGCAACTGCTGGAGCGGGTCATGCGCCTTCCACAAGCCACATCGGCCAACGCTGCTCCTTCCTTGCCGGCGGCTTGT < 8:318271/149‑1 CTCGCCGGCAGGATTGGTACGTTGGTCAACCAGTTGCGCGAGGGCGGTGTAACCGCAGACCCGCAACTGCTGGAGCGGGTCATGCGCCTTCCACAAGCCACATCGGACAACGCTGCTCCTTCCTTGCCGGCGGCTTGTG < 1:18656/139‑1 CTCGCCGGCAGGATTGGTACGTTGGTCAACCAGTTGCGCGAGGGCGGTGTAACCGCAGACCCGCAACTGCTGGAGCGGGTCATGCGCCTTCCACAAGCCACATCGGACAACGCTGCTCCTTCCTTGCCGGCGGCTTGTG > 2:18656/1‑139 TCGCCGGCAGGATTGGTACGTTGGTCAACCAGTTGCGCGAGGGCGGTGTAACCGCAGACCCGCAACTGCTGGAGCGGGTCATGCGCCTTCCACAA < 5:234737/95‑1 TCGCCGGCAGGATTGGTACGTTGGTCAACCAGTTGCGCGAGGGCGGTGTAACCGCAGACCCGCAACTGCTGGAGCGGGTCATGCGCCTTCCACAA > 6:234737/1‑95 CAAGCCACATCGGCCAACGCTGCTCCTTCCTTGCCGGCGGCTTGTGGAAGGCGCATGACCCGCTCCAGCAGTTGCGGGTCTGCGGTTACACCGCCCTCGCGCAACTGGTTGACCAACGTACCAATCCTGCCGGCGAGCCGCACGCGCGT > 2:88011/1‑149 CAAGCCACATCGGCCAACGCTGCTCCTTCCTTGCCGGCGGCTTGTGGAAGGCGCATGACCCGCTCCAGCAGTTGCGGGTCTGCGGTTACACCGCCCTCGCGCAACTGGTTGACCAACGTACCAATCCTGCCGGCGAGCCGCACGCGC > 1:238442/1‑147 CAAGCCACATCGGCCAACGCTGCTCCTTCCTTGCCGGCGGCTTGTGGAAGGCGCATGACCCGCTCCAGCAGTTGCGGGTCTGCGGTTACACCGCCCTCGCGCAACTGGTTGACCAACGTACCAATCCTGCCGGCGAGCCGCACGCGC < 2:238442/147‑1 CAAGCCACATCGGCCAACGCTGCTCCTTCCTTGCCGGCGGCTTGTGGAAGGCGCATGACCCGCTCCAGCAGTTGCGGGTCTGCGGTTACACCGCCCTCGCGCAACTGGTTGACCAACGTACCAATCCTGCCGGCGAGCCGCACGCCCGT > 8:53288/1‑149 AAGCCACATCGGCCAACGCTGCTCCTTCCTTGCCGGCGGCTTGTGGAAGGCGCATGACCCGCTCCAGCAGTTGCGGGTCTGCGGTTACACCGCCCTCGCGCAACTGGTTGACCAACGTACCAATCCTGCCGGCGAGCCGCACGCGCGTG > 6:278340/1‑149 CCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGATTGGTACGTTGGTCAACCAGTTGCGCGAGGGCGGTGTAACCGCAGACCCGCAACTGCTGGAGCGGGTCATGCGCCTTCCACAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2734933‑2735070‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagccACATCGGCCAACGCTGCTCCTTCCTTGCCGGCGGCTTGTGGAAGGCGCATGACCCGCTCCAGCAGTTGCGGGTCTGCGGTTACACCGCCCTCGCGCAACTGGTTGACCAACGTACCAATCCTGCCGGCGAGCCGCACGCGCGTG < NC_002947/2735102‑2734959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |