New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2804786	51 (0.970)	4 (0.080)	4/242	NT	9.1%	coding (599/1023 nt)	rbsR	DNA‑binding transcriptional repressor
	?	NC_002947	= 2804866	31 (0.620)					coding (679/1023 nt)	rbsR	DNA‑binding transcriptional repressor

TTGACCACGAGCAGGGGGCGTACCTGGCCACCCGGCATCTGCTGGAGCTTGGCCATCGCGACGTCGCCTATATCGGCGGCCCCGCCGAAACCGGGGTTACCCAGCTGCGCCTGAGCGGCTTCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2804660‑2804786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgCTGCATGGCCACCCGGGCTGGTGAAGTCGCAGTGCAGTACACGGCTGCCCGGCACGGGCGCACCGGCTTCGGCCATGGCACGGCGGAAGCCGCTCAGGCGCAGCTGGGTAACCCCGGTTTCGGCGGGGCCGCCGATATAGGCGACGTC  <  NC_002947/2804866‑2804719                                                                                                                                                                                                                                                                                     TTGACCACGAGCAGGGGGCGTACCTGGCCACCCGGCATCTGCTGGAGCTTGGCCATCGCGACGTCGCCTATATCGGCGGCCCCGCCGAAACCGGGGTTACCCAGCTGCGCCTGAGCGGCTTCCGCCGCTGCATGGCCACCCGGGCTGGT                                                                                                                                >  6:208412/1‑149                                                       ATCGCGACGTCGCCTATATCGGCGGCCCCGCCGAAACCGGGGTTACCCAGCTGCGCCTGAGCGGCTTCCGCCGCTGCATGGCCACCCGGGCTGGTGAAGTCGCAGTGCAGTACACGGCTGCCCGGCACGGGCGCACCGGCTTCGGCCAT                                                                          >  6:311693/1‑149                                                               GTCGCCTATATCGGCGGCCCCGCCGAAACCGGGGTTACCCAGCTGCGCCTGAGCGGCTTCCGCCGCTGCATGGCCACCCGGGCTGGTGAAGTCGCAGTGCAGTACACGGCTGCCCGGCACGGGCGCACCGGCTTCGGCCATGGCACGGC                                                                  <  5:208412/149‑1                                                                TCGCCTATATCGGCGGCCCCGCCGAAACCGGGGTTACCCAGCTGCGCCTGAGCGGCTTCCGCCGCTGCATGGCCACCCGGGCTGGTGAAGTCGCAGTGCAGTACACGGCTGCCCGGCACGGGCGCACCGGCTTCGGCCATGGCACGGCG                                                                 <  5:311693/149‑1                                                                                                                               GCTGCATGGCCACCCGGGCTGGTGAAGTCGCAGTGCAGTACACGGCTGCCCGGCACGGGCGCACCGGCTTCGGCCATGGCACGGCGGAAGCCGCTCAGGCGCAGCTGGGTAACCCCGGTTTCGGCGGGGCCGCCGATATAGGCGACGTC  <  4:48594/149‑1                                                                                                                                                                                                                                                                                     TTGACCACGAGCAGGGGGCGTACCTGGCCACCCGGCATCTGCTGGAGCTTGGCCATCGCGACGTCGCCTATATCGGCGGCCCCGCCGAAACCGGGGTTACCCAGCTGCGCCTGAGCGGCTTCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2804660‑2804786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgCTGCATGGCCACCCGGGCTGGTGAAGTCGCAGTGCAGTACACGGCTGCCCGGCACGGGCGCACCGGCTTCGGCCATGGCACGGCGGAAGCCGCTCAGGCGCAGCTGGGTAACCCCGGTTTCGGCGGGGCCGCCGATATAGGCGACGTC  <  NC_002947/2804866‑2804719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.