New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2856265 =	39 (0.740)	3 (0.060)	3/246	NT	7.4%	coding (90/168 nt)	PP_2508	hypothetical protein
	?	NC_002947	2856332 =	37 (0.720)					coding (157/168 nt)	PP_2508	hypothetical protein

GCACCTCGCGCCGTGACGAACGACCCCCATGGCAGCCTTGAGCGCGGGGATGATGTTCATGGCGGTGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2856334‑2856265 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggTGCCTGATATGAAAAACATCCTGATTTCAGCGCTGACTGCCCAAGACTTGTTCCTGCGTGTGATGGTCGTGCTCGCGGCCTGCGACTACCTAC  >  NC_002947/2856332‑2856424                                                                                                                                                                     GCACCTCGCGCCGTGACGAACGACCCCCATGGCAGCCTTGAGCGCGGGGATGATGTTCATGGCGGTGAGGTGCCTGATATGAAAAACATCCTGATTTCAGCGCTGACTGCCCAAGACTTGTTCCTGCGTGTGATGGTCGTGCTCGCGGC                >  5:135441/1‑149      TCGCGCCGTGACGAACGACCCCCATGGCAGCCTTGAGCGCGGGGATGATGTTCATGGCGGTGAGGTGCCTGATATGAAAAACATCCTGATTTCAGCGCTGACTGCCCAAGACTTGTTCCTGCGTGTGATGGTCGTGCTCGCGGCCTGC            >  3:212537/1‑148                ACGAACGACCCCCATGGCAGCCTTGAGCGCGGGGATGATGTTCATGGCGGTGAGGTGCCTGATATGAAAAACATCCTGATTTCAGCGCTGACTGCCCAAGACTTGTTCCTGCGTGTGATGGTCGTGCTCGCGGCCTGCGACTACCTAC  <  6:135441/148‑1                                                                                                                                                                     GCACCTCGCGCCGTGACGAACGACCCCCATGGCAGCCTTGAGCGCGGGGATGATGTTCATGGCGGTGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2856334‑2856265 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggTGCCTGATATGAAAAACATCCTGATTTCAGCGCTGACTGCCCAAGACTTGTTCCTGCGTGTGATGGTCGTGCTCGCGGCCTGCGACTACCTAC  >  NC_002947/2856332‑2856424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.