| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2976750 = | 62 (1.170) | 5 (0.100) | 5/236 | NT | 9.3% | coding (686/816 nt) | PP_2603 | hypothetical protein |
| ? | NC_002947 | 2976817 = | 40 (0.820) | coding (753/816 nt) | PP_2603 | hypothetical protein | |||||
CGGTGCCATGCGCCACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2976906‑2976750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGTCC > NC_002947/2976817‑2976959 CGGTGCCATGCGCCACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCACGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGG < 5:344803/149‑1 CCATGCGCCACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAG < 7:1142/148‑1 CTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTA < 7:203638/119‑1 CTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTA > 8:203638/1‑119 GCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGAT < 7:196971/130‑1 GCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGAT > 8:196971/1‑130 GCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTAC > 4:333848/1‑149 GCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTG > 4:89034/1‑149 GCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTG > 4:96644/1‑149 AGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGTCC > 2:144113/1‑149 AGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTT > 5:122633/1‑145 AGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTT < 6:122633/145‑1 CGGTGCCATGCGCCACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2976906‑2976750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGTCC > NC_002947/2976817‑2976959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |