| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2976750 = | 62 (1.170) | 5 (0.100) | 5/236 | NT | 9.3% | coding (686/816 nt) | PP_2603 | hypothetical protein |
| ? | NC_002947 | 2976817 = | 40 (0.820) | coding (753/816 nt) | PP_2603 | hypothetical protein | |||||
GATCCTGCGCCAGGCGCGTAACGAGCGACGCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGTCC > NC_002947/2976679‑2976959 | gaTCCTGCGCCAGGCGCGTATCGAGCGACGCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGaa > 4:24873/1‑148 (MQ=255) tCCTGCGCCAGGCGCGTAACGAGCGACGCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAg < 4:287040/139‑1 (MQ=255) tCCTGCGCCAGGCGCGTAACGAGCGACGCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAg > 3:287040/1‑139 (MQ=255) cAGGCGCGTAACGAGCGACGCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAgcgcgcgcg > 3:93433/1‑149 (MQ=255) taccgcctgggctttctccagcgccatgcgcgcgcgctgttcgccactgACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAg > 8:203638‑M1/50‑119 (MQ=255) taccgcctgggctttctccagcgccatgcgcgcgcgctgttcgccactgACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAg < 7:203638‑M1/70‑1 (MQ=255) cGACGCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGgaga > 1:303108/1‑148 (MQ=255) gACGCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGGGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGaaa < 3:24873/149‑1 (MQ=255) aCGCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACAGGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAg > 1:249047/1‑149 (MQ=255) gCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGcc < 2:249047/149‑1 (MQ=255) gCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGcc < 5:286958/149‑1 (MQ=255) gCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGcc > 2:140790/1‑149 (MQ=255) ttCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAgcgcgcgcttg < 5:303662/130‑4 (MQ=255) ttCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAgcgcgcgcttg > 6:303662/1‑127 (MQ=255) cccGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCa < 3:105915/147‑1 (MQ=255) ccGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAgg < 3:157607/148‑1 (MQ=255) ccGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAgg < 7:271552/148‑1 (MQ=255) aTGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTAtt < 4:93433/148‑1 (MQ=255) ggCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAgc < 5:259151/109‑1 (MQ=255) ggCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAgc > 6:259151/1‑109 (MQ=255) gCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGc < 1:140790/148‑1 (MQ=255) gTTGGCCTGTTACACGCCTTTCCGCCGAGCGTGCCGCTGAGCCTGGAACTCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGTCCGCGGTCTGa < 8:73325/144‑1 (MQ=255) gTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGa < 2:303108/144‑1 (MQ=255) tGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGaa > 1:175990/1‑83 (MQ=255) tGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGaa < 2:175990/83‑1 (MQ=255) tGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGt > 6:107868/1‑149 (MQ=255) ctgacgccttgctccagcaattgccgcgtggggatttccaggctcagcggcacgctcggcggcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTa > 8:203638‑M2/71‑119 (MQ=255) ctgacgccttgctccagcaattgccgcgtggggatttccaggctcagcggcacgctcggcggcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTa < 7:203638‑M2/49‑1 (MQ=255) acacGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGgcg > 5:53935/1‑149 (MQ=255) acacGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGgc < 8:233781/148‑1 (MQ=255) acacGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGgc > 7:233781/1‑148 (MQ=255) cacGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGgcgc < 5:107868/149‑1 (MQ=255) cacGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGgcg > 1:33531/1‑148 (MQ=255) cacGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGgc > 4:143302/1‑147 (MQ=255) cacGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGgc < 3:143302/147‑1 (MQ=255) gccttgctccagcaattgccgcgtggggatttccaggctcagcggcacgctcggcggcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGAt > 8:196971‑M2/66‑130 (MQ=255) gccttgctccagcaattgccgcgtggggatttccaggctcagcggcacgctcggcggcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGAt < 7:196971‑M2/65‑1 (MQ=255) CTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATgg < 7:1142‑M1/148‑1 (MQ=255) CCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCGTGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCg < 5:344803‑M1/149‑1 (MQ=255) gcaattgccgcgtggggatttccaggctcagcggcaattgctggagcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTAc > 4:333848‑M2/55‑149 (MQ=255) gCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGc > 6:257/1‑149 (MQ=255) aGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCGTGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGa < 6:344803/149‑1 (MQ=255) aGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTcgc < 6:53935/147‑1 (MQ=255) gAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTg < 2:125028/87‑1 (MQ=255) gAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTg > 1:125028/1‑87 (MQ=255) aaaTCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAAcc < 2:33531/149‑1 (MQ=255) cccACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCcaca < 8:1142/148‑1 (MQ=255) cccACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCacac > 5:364666/1‑149 (MQ=255) cACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACAcc > 1:217735/1‑148 (MQ=255) aCGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCg > 7:54656/1‑148 (MQ=255) cAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTg < 5:257/149‑1 (MQ=255) gAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGt < 6:240939/121‑1 (MQ=255) gAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGt > 5:240939/1‑121 (MQ=255) gAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGt > 8:312751/1‑149 (MQ=255) gcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTg > 4:96644‑M2/10‑149 (MQ=255) gcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTg > 4:89034‑M2/10‑149 (MQ=255) aggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGtt < 6:122633‑M2/139‑1 (MQ=255) aggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGtt > 5:122633‑M2/7‑145 (MQ=255) aggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGTcc > 2:144113‑M2/7‑149 (MQ=255) | GATCCTGCGCCAGGCGCGTAACGAGCGACGCTTCCCGGGTGATGGCGATGCCGATCTGGTTGGCCTGTTACACGCCTTGCCGCCGAGCGTGCCGCTGAGCCTGGAAATCCCCACGCGGCAATTGCTGGAGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGTCC > NC_002947/2976679‑2976959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |