| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3026426 = | 32 (0.610) | 4 (0.080) | 5/244 | NT | 11.0% | coding (210/1800 nt) | PP_2641 | iron‑sulfur cluster‑binding protein |
| ? | NC_002947 | 3026446 = | 34 (0.670) | coding (190/1800 nt) | PP_2641 | iron‑sulfur cluster‑binding protein | |||||
TCCATTTGCCCCGAGGTGCTCATGCAAAGCCGCCACGTCATTGAATTGTCGCCCTCGGGCAAAACCTTCGAAGCCAGCCAGGAGCTGCTGCTCGATGCCATGCTCGCCAGCGGCCTGCCGGTACCCTTTTCCTGCCGCCGC‑GGCGCCTGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3026578‑3026426‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCGGGGCAAATGGAGGTTCGATTG > NC_002947/3026446‑3026588 TCCATTTGCCCCGAGGTGCTCATGCAAAGCCGCCACGTCATTGAATTGTCGCCCTCGGGCAAAACCTTCGAAGCCAGCCAGGAGCTGCTGCTCGATGCCATGCTCGCCAGCGGCCTGCCGGTACCCTTTTCCTGCCGCCGC‑GGCGCCTG > 8:238123/1‑149 ATTTGCCCCGAGGTGCTCATGCAAAGCCGCCACGTCATTGAATTGTCGCCCTCGGGCAAAACCTTCGAAGCCAGCCAGGAGCTGCTGCTCGATGCCATGCTCGCCAGCGGCCTGCCGGTACCCTTTTCCTGCCGCCGC‑GGCGCCTGCGG < 8:33108/149‑1 ATTTGCCCCGAGGTGCTCATGCAAAGCCGCCACGTCATTGAATTGTCGCCCTCGGGCAAAACCTTCGAAGCCAGCCAGGAGCTGCTGCTCGATGCCATGCTCGCCAGCGGCCTGCCGGTACCCTTTTCCTGCCGCCGC‑GGCGCCTGCGG < 8:69025/149‑1 GCCCCGAGGTGCTCATGCAAAGCCGCCACGTCATTGAATTGTCGCCCTCGGGCAAAACCTTCGAAGCCAGCCAGGAGCTGCTGCTCGATGCCATGCTCGCCAGCGGCCTGCCGGTACCCTTTTCCTGCCGCCGCAGGCGCC‑GCGGCgg < 8:114668/148‑3 CCCCGAGGTGCTCATGCAAAGCCGCCACGTCATTGAATTGTCGCCCTCGGGCAAAACCTTCGAAGCCAGCCAGGAGCTGCTGCTCGATGCCATGCTCGCCAGCGGCCTGCCGGTACCCTTTTCCTGCCGCCGCAGGCGCC‑GCGGCggca < 6:332803/149‑5 TTGAATTGTCGCCCTCGGGCAAAACCTTCGAAGCCAGCCAGGAGCTGCTGCTCGATGCCATGCTCGCCAGCGGCCTGCCGGTACCCTTTTCCTGCCGCAGG‑CGCCGCGGCGGCAGGAAAAGGG > 7:6030/1‑123 TTGAATTGTCGCCCTCGGGCAAAACCTTCGAAGCCAGCCAGGAGCTGCTGCTCGATGCCATGCTCGCCAGCGGCCTGCCGGTACCCTTTTCCTGCCGCAGG‑CGCCGCGGCGGCAGGAAAAGGG < 8:6030/123‑1 TTTTCCTGCCGCCGC‑GGCGCCTGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAA > 5:289359/1‑94 TTTTCCTGCCGCCGC‑GGCGCCTGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAA < 6:289359/94‑1 CGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCGGGGCAAATGGAGGTTCGATTG < 1:152458/147‑1 GGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCAT > 3:180343/1‑115 GGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCAT < 4:180343/115‑1 TCCATTTGCCCCGAGGTGCTCATGCAAAGCCGCCACGTCATTGAATTGTCGCCCTCGGGCAAAACCTTCGAAGCCAGCCAGGAGCTGCTGCTCGATGCCATGCTCGCCAGCGGCCTGCCGGTACCCTTTTCCTGCCGCCGC‑GGCGCCTGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3026578‑3026426‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCGGGGCAAATGGAGGTTCGATTG > NC_002947/3026446‑3026588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |